ASU Electronic Theses and Dissertations
This collection includes most of the ASU Theses and Dissertations from 2011 to present. ASU Theses and Dissertations are available in downloadable PDF format; however, a small percentage of items are under embargo. Information about the dissertations/theses includes degree information, committee members, an abstract, supporting data or media.
In addition to the electronic theses found in the ASU Digital Repository, ASU Theses and Dissertations can be found in the ASU Library Catalog.
Dissertations and Theses granted by Arizona State University are archived and made available through a joint effort of the ASU Graduate College and the ASU Libraries. For more information or questions about this collection contact or visit the Digital Repository ETD Library Guide or contact the ASU Graduate College at gradformat@asu.edu.
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- Creators: Tepedelenlioğlu, Cihan
The proposed mapping is generalized to express information on a protein's sequence location, structure and function onto a highly localized three-dimensional (3-D) Gaussian waveform. In particular, as analysis of protein homology has shown that incorporating different kinds of information into an alignment process can yield more robust alignment results, a pairwise protein structure alignment method is proposed based on a joint similarity measure of multiple mapped protein attributes. The 3-D mapping allocates protein properties into distinct regions in the time-frequency plane in order to simplify the alignment process by including all relevant information into a single, highly customizable waveform. Simulations demonstrate the improved performance of the joint alignment approach to infer relationships between proteins, and they provide information on mutations that cause changes to both the sequence and structure of a protein.
In addition to the biology-based signal processing methods, a statistical method is considered that uses a physics-based model to improve processing performance. In particular, an externally developed physics-based model for sea clutter is examined when detecting a low radar cross-section target in heavy sea clutter. This novel model includes a process that generates random dynamic sea clutter based on the governing physics of water gravity and capillary waves and a finite-difference time-domain electromagnetics simulation process based on Maxwell's equations propagating the radar signal. A subspace clutter suppression detector is applied to remove dominant clutter eigenmodes, and its improved performance over matched filtering is demonstrated using simulations.
visual change detection and its applications in multi-temporal synthetic aperture radar (SAR) images.
The Canny edge detector is one of the most widely-used edge detection algorithms due to its superior performance in terms of SNR and edge localization and only one response to a single edge. In this work, we propose a mechanism to implement the Canny algorithm at the block level without any loss in edge detection performance as compared to the original frame-level Canny algorithm. The resulting block-based algorithm has significantly reduced memory requirements and can achieve a significantly reduced latency. Furthermore, the proposed algorithm can be easily integrated with other block-based image processing systems. In addition, quantitative evaluations and subjective tests show that the edge detection performance of the proposed algorithm is better than the original frame-based algorithm, especially when noise is present in the images.
In the context of multi-temporal SAR images for earth monitoring applications, one critical issue is the detection of changes occurring after a natural or anthropic disaster. In this work, we propose a novel similarity measure for automatic change detection using a pair of SAR images
acquired at different times and apply it in both the spatial and wavelet domains. This measure is based on the evolution of the local statistics of the image between two dates. The local statistics are modeled as a Gaussian Mixture Model (GMM), which is more suitable and flexible to approximate the local distribution of the SAR image with distinct land-cover typologies. Tests on real datasets show that the proposed detectors outperform existing methods in terms of the quality of the similarity maps, which are assessed using the receiver operating characteristic (ROC) curves, and in terms of the total error rates of the final change detection maps. Furthermore, we proposed a new
similarity measure for automatic change detection based on a divisive normalization transform in order to reduce the computation complexity. Tests show that our proposed DNT-based change detector
exhibits competitive detection performance while achieving lower computational complexity as compared to previously suggested methods.
This thesis considers a full-duplex MIMO relay which amplifies and forwards the received signals, between a source and a destination that do not a have line of sight. Full-duplex mode raises the problem of self-interference. Though all the links in the system undergo frequency flat fading, the end-to-end effective channel is frequency selective. This is due to the imperfect cancellation of the self-interference at the relay and this residual self-interference acts as intersymbol interference at the destination which is treated by equalization. This also leads to complications in form of recursive equations to determine the input-output relationship of the system. This also leads to complications in the form of recursive equations to determine the input-output relationship of the system.
To overcome this, a signal flow graph approach using Mason's gain formula is proposed, where the effective channel is analyzed with keen notice to every loop and path the signal traverses. This gives a clear understanding and awareness about the orders of the polynomials involved in the transfer function, from which desired conclusions can be drawn. But the complexity of Mason's gain formula increases with the number of antennas at relay which can be overcome by the proposed linear algebraic method. Input-output relationship derived using simple concepts of linear algebra can be generalized to any number of antennas and the computation complexity is comparatively very low.
For a full-duplex amplify-and-forward MIMO relay system, assuming equalization at the destination, new mechanisms have been implemented at the relay that can compensate the effect of residual self-interference namely equal-gain transmission and antenna selection. Though equal-gain transmission does not perform better than the maximal ratio transmission, a trade-off can be made between performance and implementation complexity. Using the proposed antenna selection strategy, one pair of transmit-receive antennas at the relay is selected based on four selection criteria discussed. Outage probability analysis is performed for all the strategies presented and detailed comparison has been established. Considering minimum mean-squared error decision feedback equalizer at the destination, a bound on the outage probability has been obtained for the antenna selection case and is used for comparisons. A cross-over point is observed while comparing the outage probabilities of equal-gain transmission and antenna selection techniques, as the signal-to-noise ratio increases and from that point antenna selection outperforms equal-gain transmission and this is explained by the fact of reduced residual self-interference in antenna selection method.
In underlay CR systems, where secondary users (SUs) transmit simultaneously with primary users (PUs), reliable communication is by all means guaranteed for PUs, which likely deteriorates SUs’ performance. To overcome this issue, cooperation exclusively among SUs is achieved through multi-user diversity (MUD), where each SU is subject to an instantaneous interference constraint at the primary receiver. Therefore, the active number of SUs satisfying this constraint is random. Under different user distributions with the same mean number of SUs, the stochastic ordering of SU performance metrics including bit error rate (BER), outage probability, and ergodic capacity are made possible even without observing closed form expressions. Furthermore, a cooperation is assumed between primary and secondary networks, where those SUs exceeding the interference constraint facilitate PU’s transmission by relaying its signal. A fundamental performance trade-off between primary and secondary networks is observed, and it is illustrated that the proposed scheme outperforms non-cooperative underlay CR systems in the sense of system overall BER and sum achievable rate.
Similar to conventional cellular networks, CR systems suffer from an overloaded receiver having to manage signals from a large number of users. To address this issue, D2D communications has been proposed, where direct transmission links are established between users in close proximity to offload the system traffic. Several new cooperative spectrum access policies are proposed allowing coexistence of multiple D2D pairs in order to improve the spectral efficiency. Despite the additional interference, it is shown that both the cellular user’s (CU) and the individual D2D user's achievable rates can be improved simultaneously when the number of D2D pairs is below a certain threshold, resulting in a significant multiplexing gain in the sense of D2D sum rate. This threshold is quantified for different policies using second order approximations for the average achievable rates for both the CU and the individual D2D user.
all the sensors in the network achieve global agreement using only local transmissions. In this dissertation, several consensus and consensus-based algorithms in WSNs are studied.
Firstly, a distributed consensus algorithm for estimating the maximum and minimum value of the initial measurements in a sensor network in the presence of communication noise is proposed. In the proposed algorithm, a soft-max approximation together with a non-linear average consensus algorithm is used. A design parameter controls the trade-off between the soft-max error and convergence speed. An analysis of this trade-off gives guidelines towards how to choose the design parameter for the max estimate. It is also shown that if some prior knowledge of the initial measurements is available, the consensus process can be accelerated.
Secondly, a distributed system size estimation algorithm is proposed. The proposed algorithm is based on distributed average consensus and L2 norm estimation. Different sources of error are explicitly discussed, and the distribution of the final estimate is derived. The CRBs for system size estimator with average and max consensus strategies are also considered, and different consensus based system size estimation approaches are compared.
Then, a consensus-based network center and radius estimation algorithm is described. The center localization problem is formulated as a convex optimization problem with a summation form by using soft-max approximation with exponential functions. Distributed optimization methods such as stochastic gradient descent and diffusion adaptation are used to estimate the center. Then, max consensus is used to compute the radius of the network area.
Finally, two average consensus based distributed estimation algorithms are introduced: distributed degree distribution estimation algorithm and algorithm for tracking the dynamics of the desired parameter. Simulation results for all proposed algorithms are provided.
When a relay in a multi-hop full-duplex system amplifies and forwards its received signals, due to the presence of self-interference, the input-output relationship is determined by recursive equations. This thesis introduces a signal flow graph approach to solve the problem of finding the input-output relationship of a multi-hop amplify-and-forward full-duplex relaying system using Mason's gain formula. Even when all links have flat fading channels, the residual self-interference component due to imperfect self-interference cancellation at the relays results in an end-to-end effective channel that is an all-pole frequency-selective channel. Also, by assuming the relay channels undergo frequency-selective fading, the outage probability analysis is performed and the performance is compared with the case when the relay channels undergo frequency-flat fading. The outage performance of this system is performed assuming that the destination employs an equalizer or a matched filter.
For the case of a two-hop (single relay) full-duplex amplify-and-forward relaying system, the bounds on the outage probability are derived by assuming that the destination employs a matched filter or a minimum mean squared error decision feedback equalizer. For the case of a three-hop (two-relay) system with frequency-flat relay channels, the outage probability analysis is performed by considering the output SNR of different types of equalizers and matched filter at the destination. Also, the closed-form upper bounds on the output SNR are derived when the destination employs a minimum mean squared error decision feedback equalizer which is used in outage probability analysis. It is seen that for sufficiently high target rates, full-duplex relaying with equalizers is always better than half-duplex relaying in terms of achieving lower outage probability, despite the higher RSI. In contrast, since full-duplex relaying with MF is sensitive to RSI, it is outperformed by half-duplex relaying under strong RSI.
A common aspect of the two frameworks is the packet service time. Thus, the effect of multiple channels on the service time is studied first. The problem is formulated as an optimal stopping rule problem where it is required to decide at which channel the SU should stop sensing and begin transmission. I provide a closed-form expression for this optimal stopping rule and the optimal transmission power of secondary user (SU).
The average-delay framework is then presented in a single CR channel system with a base station (BS) that schedules the SUs to minimize the average delay while protecting the primary users (PUs) from harmful interference. One of the contributions of the proposed algorithm is its suitability for heterogeneous-channels systems where users with statistically low channel quality suffer worse delay performances. The proposed algorithm guarantees the prespecified delay performance to each SU without violating the PU's interference constraint.
Finally, in the hard-deadline framework, I propose three algorithms that maximize the system's throughput while guaranteeing the required percentage of packets to be transmitted by their deadlines. The proposed algorithms work in heterogeneous systems where the BS is serving different types of users having real-time (RT) data and non-real-time (NRT) data. I show that two of the proposed algorithms have the low complexity where the power policies of both the RT and NRT users are in closed-form expressions and a low-complexity scheduler.
existence of objects from which no direct information can be obtained
experimentally or observationally. A well known example is to
ascertain the existence of black holes of various masses in different
parts of the universe from indirect evidence, such as X-ray emissions.
In the field of complex networks, the problem of detecting
hidden nodes can be stated, as follows. Consider a network whose
topology is completely unknown but whose nodes consist of two types:
one accessible and another inaccessible from the outside world. The
accessible nodes can be observed or monitored, and it is assumed that time
series are available from each node in this group. The inaccessible
nodes are shielded from the outside and they are essentially
``hidden.'' The question is, based solely on the
available time series from the accessible nodes, can the existence and
locations of the hidden nodes be inferred? A completely data-driven,
compressive-sensing based method is developed to address this issue by utilizing
complex weighted networks of nonlinear oscillators, evolutionary game
and geospatial networks.
Both microbes and multicellular organisms actively regulate their cell
fate determination to cope with changing environments or to ensure
proper development. Here, the synthetic biology approaches are used to
engineer bistable gene networks to demonstrate that stochastic and
permanent cell fate determination can be achieved through initializing
gene regulatory networks (GRNs) at the boundary between dynamic
attractors. This is experimentally realized by linking a synthetic GRN
to a natural output of galactose metabolism regulation in yeast.
Combining mathematical modeling and flow cytometry, the
engineered systems are shown to be bistable and that inherent gene expression
stochasticity does not induce spontaneous state transitioning at
steady state. By interfacing rationally designed synthetic
GRNs with background gene regulation mechanisms, this work
investigates intricate properties of networks that illuminate possible
regulatory mechanisms for cell differentiation and development that
can be initiated from points of instability.