ASU Electronic Theses and Dissertations
This collection includes most of the ASU Theses and Dissertations from 2011 to present. ASU Theses and Dissertations are available in downloadable PDF format; however, a small percentage of items are under embargo. Information about the dissertations/theses includes degree information, committee members, an abstract, supporting data or media.
In addition to the electronic theses found in the ASU Digital Repository, ASU Theses and Dissertations can be found in the ASU Library Catalog.
Dissertations and Theses granted by Arizona State University are archived and made available through a joint effort of the ASU Graduate College and the ASU Libraries. For more information or questions about this collection contact or visit the Digital Repository ETD Library Guide or contact the ASU Graduate College at gradformat@asu.edu.
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To read DNA nucleotides with high accuracy in an STM tunnel junction a series of nitrogen-based heterocycles were designed and examined to check their capabilities to interact with naturally occurring DNA nucleotides by hydrogen bonding in the tunnel junction. These recognition molecules are Benzimidazole, Imidazole, Triazole and Pyrrole. Benzimidazole proved to be best among them showing DNA nucleotide classification accuracy close to 99%. Also, Imidazole reader can read an abasic monophosphate (AP), a product from depurination or depyrimidination that occurs 10,000 times per human cell per day.
In another study, I have investigated a new universal reader, 1-(2-mercaptoethyl)pyrene (Pyrene reader) based on stacking interactions, which should be more specific to the canonical DNA nucleosides. In addition, Pyrene reader showed higher DNA base-calling accuracy compare to Imidazole reader, the workhorse in our previous projects. In my other projects, various amino acids and RNA nucleoside monophosphates were also classified with significantly high accuracy using RT. Twenty naturally occurring amino acids and various RNA nucleosides (four canonical and two modified) were successfully identified. Thus, we envision nanopore sequencing biomolecules using Recognition Tunneling (RT) that should provide comprehensive betterment over current technologies in terms of time, chemical and instrumental cost and capability of de novo sequencing.
To evaluate size dependent stability of metal nanoparticles using electrochemical techniques in aqueous media, a synthetic route was designed to produce water soluble Pd nanoparticles. Also, a purification technique was developed to obtain monodisperse metal nanoparticles to study size dependent stability using electrochemical methods. Chapter 2 will describe in detail the synthesis, characterization and size dependent anodic dissolution studies of water soluble palladium nanoparticles.
The cost associated with using expensive metal catalysts can further decreased by using the underpotential deposition (UPD) technique, in which one metal is electrodeposited in monolayer or submonolayer form on a different metal substrate. Electrochemically, this process can be detected by the presence of a deposition peak positive to the bulk deposition potential in a cyclic voltammetry (CV) experiment. The difference between the bulk deposition potential and underpotential deposition peak (i.e. the UPD shift), which is a measure of the energetics of the monolayer deposition step, depends on the work function difference between the metal pairs. Chapter 3 will explore how metal nanoparticles of different sizes will change the energetics of the UPD phenomenon, using the UPD of Cu on palladium nanoparticles as an example. It will be shown that the UPD shift depends on the size of the nanoparticle substrate in a way that is understandable based on the Plieth model.
High electrocatalytic activity of palladium towards ethanol oxidation in an alkaline medium makes it an ideal candidate for the anode electrocatalyst in direct ethanol based fuel cells (DEFCs). Chapter 4 will explore the poisoning of the catalytic activity of palladium in the presence of halide impurities, often used in synthesis of palladium nanoparticles as precursors or shape directing agents.