Barrett, The Honors College Thesis/Creative Project Collection

As the search for life in our universe grows, it is important to not only locate planets outside of our solar system, but also to work towards the ability to understand and characterize their nature. Many current research endeavors focus on the discovery of exoplanets throughout the surrounding universe; however, we still know very little about the characteristics of these exoplanets themselves, particularly their atmospheres. Observatories, such as the Hubble Space Telescope and the Spitzer Space Telescope, have made some of the first observations which revealed information about the atmospheres of exoplanets but have yet to acquire complete and detailed characterizations of exoplanet atmospheres. The EXoplanet Climate Infrared TElescope (EXCITE) is a mission specifically designed to target key information about the atmospheres of exoplanets - including the global and spatially resolved energy budget, chemical bulk-compositions, vertical temperature profiles and circulation patterns across the surface, energy distribution efficiency as a function of equilibrium temperatures, and cloud formation and distribution - in order to generate dynamic and detailed atmospheric characterizations. EXCITE will use phase-resolved transit spectroscopy in the 1-4 micron wavelength range to accomplish these science goals, so it is important that the EXCITE spectrograph system is designed and tested to meet these observational requirements. For my thesis, I present my research on the EXCITE mission science goals and the design of the EXCITE spectrograph system to meet these goals, along with the work I have done in the beginning stages of testing the EXCITE spectrograph system in the lab. The primary result of my research work is the preparation of a simple optics setup in the lab to prepare a laser light source for use in the EXCITE spectrograph system - comparable to the preparation of incoming light by the EXCITE telescope system - which successfully yields an F# = 12.9 and a spot size of s = 39 ± 7 microns. These results meet the expectations of the system and convey appropriate preparation of a light source to begin the assembly and testing of the EXCITE spectrograph optics in the lab.

For this thesis, the energy of the CXLS electron beam was measured and the beam’s energy jitter was calculated. It is essential to characterize the beam’s en- ergy and energy jitter in order to ensure that the powerful x-rays produced by CXLS will be of a consistent and desirable energy. The energy of the electrons within the electron beam can be calculated through utilizing basic physics prin- ciples and the geometry of the beamline. The energy of the beam for the data collected was found to be 3.426 MeV at POP module 1 and 12.3 MeV at POP module 9. The energy jitter of the beam was determined for four different angle settings of the VPSPD for linac 1 and found to be lowest when the linac 1 VPSPD was set to an angle of 97°. The energy jitter of the beam was 1.50e-03 MeV when the VPSPD for linac 1 was set to 97°.

In thesis we will build up our operator theory for finite and infinite dimensional systems. We then prove that Heisenberg and Schrodinger representations are equivalent for systems with finite degrees of freedom. We will then make a case to switch to a C*-algebra formulation of quantum mechanics as we will prove that the Schrodinger and Heisenberg pictures become inadequate to full describe systems with infinitely many degrees of freedom because of inequivalent representations. This becomes important as we shift from single particle systems to quantum field theory, statistical mechanics, and many other areas of study. The goal of this thesis is to introduce these mathematical topics rigorously and prove that they are necessary for further study in particle physics.

The future of driving is largely headed towards autonomous vehicles, and this is clear with companies such as Tesla, Waymo, and even tech giant Apple. Many professionals predict that autonomous vehicles will likely be commercially available and legal to use in some places by the late 2020s [15]. There are some benefits to the rapid development of autonomous vehicle controllers, such as more independence for those who can’t drive due to impairments, the potential for reduced traffic, as well as possibly decreasing the number of accidents. Though these are promising prospects, there are ethical concerns regarding the implementation of such technology. The goal of this thesis is to provide an introductory literature review that discusses the history of autonomous vehicles, different levels of autonomy, ethical considerations in autonomous systems, and prior work on characterizing human driving behaviors and implementing these behaviors with autonomous vehicle controllers. Finally, recommendations are proposed for data collection on human driving behaviors in an ongoing NSF-funded project at Arizona State University, “Embodiment of Human Values Profiles in Autonomous Vehicles via Psychomimetic Controller Design.”

Bdellovibrio bacteriovorus (BB) is a gram negative predatory bacteria that uses other gram negative bacteria to proliferate non-binarily. Due to the predatory nature of BB researchers have proposed to use it as a potential biocontrol agent against other gram negative bacteria. The in vivo effect of predatory bacteria on a living host lacks thorough investigation. This paper explores BB inside and outside of the C. elegans. BB acts internally by pre- infecting C. elegans with E. coli and then treating the worms with BB. After BB treatment worm survivavbility increased and morbidity decreased. Ex- ternally, BB modulated the environment around the nematode which reduced infection rates and increased nematode lifespan and survivability. Together, the internal and external results suggest BB has the capability to act as a living antibiotic acting topically and internally to reduce infection rates.

The goal of this project was to develop a prototype for an educational tool that will help users understand how the voting system deployed by a government can affect the outcomes of elections. This tool was developed in Java SE, consisting of a model for the simulation of elections capable of supporting various voting systems, along with a variety of fairness measures, and educational and explanatory material. While a completed version of this tool would ideally be fully self-contained, easily accessible in-browser, and provide detailed visualizations of the simulated elections, the current prototype version consists of a GitHub repository containing the code, with the educational material and explanations contained within the thesis paper. Ultimately, the goal of this project was to be a stepping stone on the path to create a tool that will instill a measure of systemic skepticism in the user; to give them cause to question why our systems are built the way they are, and reasons to believe that they could be changed for the better. In undertaking this project, I hope to help in providing people with the political education needed to make informed decisions about how they want the government to function. The GitHub repository containing all the code can be found at, https://github.com/SpencerDiamond/Votes_that_Count

Plant-made virus-like particles (VLPs), composed of HIV-1 Gag and deconstructed gp41 proteins, have been shown to be safe and immunogenic in mice. Here, we report the successful production of HIV-1 Gag/dgp41 VLPs in Nicotiana benthamiana, using an enhanced geminivirus-based expression vector. This novel vector results in unique expression kinetics, with peak protein accumulation and minimal necrosis achieved on day 4 post-infiltration. In comparing various purification strategies, it was determined that a 20% ammonium sulfate precipitation is an effective and efficient method for removing plant proteins and purifying the recombinant VLPs of interest. If further purification is required, this may be achieved through ultracentrifugation. VLPs are a useful platform for a variety of biomedical applications and developing the technology to efficiently produce VLPs in the plant expression system is of critical importance.

This is a primer on the mathematic foundation of quantum mechanics. It seeks to introduce the topic in such a way that it is useful to both mathematicians and physicists by providing an extended example of abstract math concepts to work through and by going more in-depth in the math formalism than would normally be covered in a quantum mechanics class. The thesis begins by investigating functional analysis topics such as the Hilbert space and operators acting on them. Then it goes on to the postulates of quantum mechanics which extends the math formalism covered before to physics and works as the foundation for the rest of quantum mechanics.

In a hypothetical Grand Unified Theory, magnetic monopoles are a particle which would act as a charge carrier for the magnetic force. Evidence of magnetic monopoles has yet to be found and based off of their relatively high mass (4-10 TeV) will be difficult to find with current technology. The goal of my thesis is to mathematically model the magnetic monopole by finding numerical solutions to the equations of motion. In my analysis, I consider four cases: kinks, cosmic strings, global monopoles, and magnetic monopoles. I will also study electromagnetic gauge fields to prepare to include gauge fields in the magnetic monopole case. Numerical solutions are found for the cosmic string and global monopole cases. As expected, the energy is high at small distance r and drops off as r goes to infinity. Currently numerical solutions are being worked towards for electromagnetic gauge fields and the magnetic monopole case.