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Epidemiological theory normally does not predict host extinction from infectious disease because of a host density threshold below which pathogens cannot persist. However, host extinction can occur when a biotic or abiotic pathogen reservoir allows for density-independent transmission. Amphibians are facing global population decline and extinction from the emerging infectious

Epidemiological theory normally does not predict host extinction from infectious disease because of a host density threshold below which pathogens cannot persist. However, host extinction can occur when a biotic or abiotic pathogen reservoir allows for density-independent transmission. Amphibians are facing global population decline and extinction from the emerging infectious disease chytridiomycosis, caused by the fungus Batrachochytrium dentrobatidis (Bd). I use the model species Eleutherodactylus coqui to assess the impact of Bd on terrestrial direct-developing frog species, a common life history in the tropics. I tested the importance of two key factors that might influence this impact and then used laboratory experiments and published field data to model population-level impacts of Bd on E. coqui. First, I assessed the ontogenetic susceptibility of E. coqui by exposing juvenile and adult frogs to the same pathogen strain and dose. Juveniles exposed to Bd had significantly lower survival rates compared with control juveniles, while adult frogs often cleared infection. Second, I conducted experiments to determine whether E. coqui can become infected with Bd indirectly from contact with zoospores shed onto vegetation by an infected frog and from direct exposure to an infected frog. Both types of transmission were observed, making this the first demonstration that amphibians can become infected indirectly in non-aquatic habitats. Third, I tested the hypothesis that artificially-maintained cultures of Bd attenuate in pathogenicity, an effect known for other fungal pathogens. Comparing two cultures of the same Bd strain with different passage histories revealed reduced zoospore production and disease-induced mortality rates for a susceptible frog species (Atelopus zeteki) but not for the less-susceptible E. coqui. Finally, I used a mathematical model to project the population-level impacts of chytridiomycosis on E. coqui. Model analysis showed that indirect transmission, combined with either a high rate of zoospore production or low rate of zoospore mortality, is required for Bd to drive E. coqui populations below an extinction threshold. High rates of transmission plus frequent re-infection could lead to poor recruitment of infected juveniles and population decline. My research adds further insight into how emerging infectious disease is contributing to the loss of amphibian biodiversity.
ContributorsLanghammer, Penny F. (Author) / Collins, James P. (Thesis advisor) / Brooks, Thomas M (Committee member) / Burrowes, Patricia A. (Committee member) / Anderies, John M (Committee member) / Escalante, Ananias A (Committee member) / Smith, Andrew T. (Committee member) / Arizona State University (Publisher)
Created2013
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Description
As much as 40% of the world's human population relies on rivers which originate on the Qinghai-Tibetan Plateau (QTP) (Xu et al. 2009, Immerzeel et al. 2010). However, the high alpine grasslands where these rivers emanate are at a crossroads. Fed by seasonal monsoon rains and glacial runoff, these rivers'

As much as 40% of the world's human population relies on rivers which originate on the Qinghai-Tibetan Plateau (QTP) (Xu et al. 2009, Immerzeel et al. 2010). However, the high alpine grasslands where these rivers emanate are at a crossroads. Fed by seasonal monsoon rains and glacial runoff, these rivers' frequent flooding contributes to massive losses of life and property downstream (Varis et al. 2012). Additionally, upstream grasslands, which regulate the flow of these rivers, are considered to be deteriorating (Harris 2010). This thesis examines the regional vulnerability of these rivers and highlights the impacts of several policy responses, finding that both climate change and grassland degradation pose significant challenges to Asia's water security. Additionally, I suggest that many of the responses elicited by policy makers to meet these challenges have failed. One of these policies has been the poisoning of a small, endemic, burrowing mammal and keystone species, the plateau pika (Ochotona curzoniae) (Smith and Foggin 1999). Contrary to their putative classification as a pest (Fan et al. 1999), I show that the plateau pika is instead an ecosystem engineer that actively increases the infiltration rate of water on the QTP with concomitant benefits to both local ecosystems and downstream hydrological processes.
ContributorsWilson, Maxwell (Author) / Smith, Andrew T. (Thesis advisor) / Wu, Jiangou (Committee member) / Hall, Sharon J. (Committee member) / Arizona State University (Publisher)
Created2012
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Description
The relationship between biodiversity and ecosystem functioning (BEF) is a central issue in ecology, and a number of recent field experimental studies have greatly improved our understanding of this relationship. Spatial heterogeneity is a ubiquitous characterization of ecosystem processes, and has played a significant role in shaping BEF relationships.

The relationship between biodiversity and ecosystem functioning (BEF) is a central issue in ecology, and a number of recent field experimental studies have greatly improved our understanding of this relationship. Spatial heterogeneity is a ubiquitous characterization of ecosystem processes, and has played a significant role in shaping BEF relationships. The first step towards understanding the effects of spatial heterogeneity on the BEF relationships is to quantify spatial heterogeneity characteristics of key variables of biodiversity and ecosystem functioning, and identify the spatial relationships among these variables. The goal of our research was to address the following research questions based on data collected in 2005 (corresponding to the year when the initial site background information was conducted) and in 2008 (corresponding to the year when removal treatments were conducted) from the Inner Mongolia Grassland Removal Experiment (IMGRE) located in northern China: 1) What are the spatial patterns of soil nutrients, plant biodiversity, and aboveground biomass in a natural grassland community of Inner Mongolia, China? How are they related spatially? and 2) How do removal treatments affect the spatial patterns of soil nutrients, plant biodiversity, and aboveground biomass? Is there any change for their spatial correlations after removal treatments? Our results showed that variables of biodiversity and ecosystem functioning in the natural grassland community would present different spatial patterns, and they would be spatially correlated to each other closely. Removal treatments had a significant effect on spatial structures and spatial correlations of variables, compared to those prior to the removal treatments. The differences in spatial pattern of plant and soil variables and their correlations before and after the biodiversity manipulation may not imply that the results from BEF experiments like IMGRE are invalid. However, they do suggest that the possible effects of spatial heterogeneity on the BEF relationships should be critically evaluated in future studies.
ContributorsYuan, Fei (Author) / Wu, Jianguo (Thesis advisor) / Smith, Andrew T. (Committee member) / Rowe, Helen I (Committee member) / Arizona State University (Publisher)
Created2011
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Description
The purpose of my thesis is to illustrate the story of the black-footed ferret's conservation, and to provide my own suggestions for how to eventually get the species removed from the Endangered Species List, marking a successful rebound in population numbers. I highlight my personal experience working at the Phoenix

The purpose of my thesis is to illustrate the story of the black-footed ferret's conservation, and to provide my own suggestions for how to eventually get the species removed from the Endangered Species List, marking a successful rebound in population numbers. I highlight my personal experience working at the Phoenix Zoo's black-footed ferret breeding center. In the first chapter, I present the species by describing its morphology, diet, reproduction, behaviors, range, and habitat. In the second chapter, I recount the chronological history of the conservation of the species, starting with its rediscovery following its putative "extinction", and ending with its present status. In the third chapter, I discuss the threats that have led to the species' overall decline and continue to affect its persistence today. In the fourth and final chapter, I conclude by making recommendations regarding what needs to occur in order to eventually get the species delisted.
ContributorsGeer, Emily Maren (Author) / Smith, Andrew T. (Thesis director) / Minteer, Ben (Committee member) / Wells, Stuart (Committee member) / Barrett, The Honors College (Contributor) / School of Life Sciences (Contributor)
Created2014-05