Matching Items (513)
Description
With a quantum efficiency of nearly 100%, the electron transfer process that occurs within the reaction center protein of the photosynthetic bacteria Rhodobacter (Rh.) sphaeroides is a paragon for understanding the complexities, intricacies, and overall systemization of energy conversion and storage in natural systems. To better understand the way in which photons of light are captured, converted into chemically useful forms, and stored for biological use, an investigation into the reaction center protein, specifically into its cascade of cofactors, was undertaken. The purpose of this experimentation was to advance our knowledge and understanding of how differing protein environments and variant cofactors affect the spectroscopic aspects of and electron transfer kinetics within the reaction of Rh. sphaeroides. The native quinone, ubiquinone, was extracted from its pocket within the reaction center protein and replaced by non-native quinones having different reduction/oxidation potentials. It was determined that, of the two non-native quinones tested—1,2-naphthaquinone and 9,10- anthraquinone—the substitution of the anthraquinone (lower redox potential) resulted in an increased rate of recombination from the P+QA- charge-separated state, while the substitution of the napthaquinone (higher redox potential) resulted in a decreased rate of recombination.
ContributorsSussman, Hallie Rebecca (Author) / Woodbury, Neal (Thesis director) / Redding, Kevin (Committee member) / Lin, Su (Committee member) / School of Molecular Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2015-12
Description
This paper explores the complex, multifaceted relationship of science and science fiction. Because of our rapidly evolving, technology-driven world, the question of how science fiction changes, and is changed by, science is more relevant today than ever before. The nuanced relationship of science and science fiction can first be explored by analyzing the influence of science fiction on science with examples such as the XPRIZE Foundation. At the same time that science fiction influences science, changes in science will also resonate in the future of science fiction. New developments like the open-source movement and the success of platforms like Kickstarter, which allow science to be crowdsourced at unprecedented levels, are changing the landscape of scientific development. These changes are causing increased public engagement with science. Based on these changes in the way science and technology are developed, the science fiction genre seems on the cusp of a dramatic shift. Science fiction has long been dominated by dystopian and apocalyptic visions for the future, frequently the result of some catastrophe of our own making. However, because of the changes in science and technology and the public's engagement with those changes, the next generation of science fiction writers and filmmakers is likely to see a more positive outlook for humanity. Based on the interlocked past of science and science fiction, this paper argues that the changing landscape of science and technology will cause a change for the positive in the tonality of popular science fiction.
ContributorsMiller, Hillary Marie (Author) / Finn, Ed (Thesis director) / Swanner, Leandra (Committee member) / School of Film, Dance and Theatre (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2015-12
Description
This study explores the topic of the birth control use of college women, and the factors that influence their decision of whether or not to use contraception consistently. A literature review was performed on Academic Search Premier, SocIndex, Women's Studies International, Pubmed, CINAHL, and ICRW. Interviews were conducted with 7 participants recruited through convenience sampling. The results suggest that low perception of risk, lack of access, and alcohol use are all major influences on women's decisions regarding birth control. A review of current policy was also completed, and potential policy changes are suggested in order to improve college women's consistent contraceptive use.
ContributorsMorehouse, Brittany Anne (Author) / Weitz, Rose (Thesis director) / Durfee, Alesha (Committee member) / School of Politics and Global Studies (Contributor) / School of Social Transformation (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
Epigenetic mechanisms such as DNA methylation have been found to affect metabolic processes, which leads to conditions like type 2 diabetes and obesity. The aim of this project was to validate differentially methylated cytosines (DMCs) identified in skeletal muscle from seven obese, non-diabetic women pre- and 3 months post- Roux-en-Y gastric bypass surgery. DNA samples extracted from skeletal muscle were sent to the Mayo Genotyping Core to undergo reduced representation bisulfite sequencing (RRBS). Differentially methylated cytosines at chr14.105353824 of the gene CEP170B, chr19.16437949 of the KLF2 gene, chr7.130126082 of MEST, and chr15.62457572 of C2CD4B were captured from the RRBS analysis using MethylSig. Bisulfite sequencing PCR (BSP) was performed on all DMCs listed above which resulted in no significant changes in methylation post-surgery. It was concluded that an alternate, more precise method should be used for validation of the RRBS, such as pyrosequencing.
ContributorsKelley, Conley Lane (Author) / Coletta, Dawn K. (Thesis director) / Roust, Lori R. (Committee member) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
The present analysis sought to determine the relationship between Middle Woodland (ca. 2000-1700 BP) and Late Woodland (ca. 1700-1100 BP) mortuary practices in the Lower Illinois Valley. It applies alternative mortuary theories to elucidate larger social implications and the relationship between these practices. This was accomplished by first reconstructing a Late Woodland mortuary feature from the Helton Site in the Lower Illinois Valley (HN 20-36). The reconstructed feature was then assessed to identify if Middle Woodland mortuary practices were continuous with those of the Late Woodland. Lastly, the feature was interpreted in accordance with processualist, post-processualist and individual identity theories on mortuary behavior to determine the larger social implications of the funerary practices associated with the feature. From this analysis, it was concluded that Late Woodland mortuary practices exhibited elements of both continuity with, and change from their Middle Woodland predecessors. Further, the theoretical interpretations reveled that Late Woodland social systems existed as an evolved and reorganized extension of those systems that were present during the Middle Woodland period.
ContributorsSchultz, Nicholas Ryan (Author) / Buikstra, Jane E. (Thesis director) / Michelaki, Konstantina-Eleni (Committee member) / King, Jason L. (Committee member) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
An organism's ability to maintain optimal body temperature is extremely important for sustaining physiological and behavioral processes necessary for survival. However, like other physiological systems, thermobiology can be influenced by the availability of resources. Water is a vital resource that has profound implications on many aspects of biological function, including thermoregulatory pathways. However, water availability has a tendency fluctuate within any given ecosystem. While several studies have investigated the influence of water availability on a range of thermoregulatory pathways, very little attention has been given to its influence on Voluntary Maximum Temperature (VMT). We investigated the effects of dehydration on Voluntary Maximum Temperature in a captive population of Gila monsters (Heloderma suspectum). Gila monsters are large-bodied, desert dwelling lizards that experience periods of seasonal dehydration. Additionally, the effects of dehydration on their physiology and behavior have been extensively studied. We hypothesized that dehydration would reduce VMT. As expected, there was a significant decrease in exit temperature as blood osmolality increased. This is presumed to be in an effort to decrease water loss. Adaptations that allow desert dwelling organisms to conserve water are highly advantageous due to seasonal water constraints. Our findings offer insight on how the behavior of these organisms may change in response to changes in climate.
ContributorsHartson, Callie Elizabeth (Author) / DeNardo, Dale (Thesis director) / Angilletta, Michael (Committee member) / Camacho, Agus (Committee member) / School of Life Sciences (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
A single splice site mutation in the mitochondrial methionyl-tRNA formyltransferase (MTFMT) gene is described in three patients with mitochondrial disease from two unrelated families. Nuclear-encoded MTFMT localized to the mitochondria is responsible for the formylation of Met-tRNAMet necessary for the initiation of translation in the mitochondria. This mutation has been associated with mitochondrial disease (oxidative phosphorylation deficiencies due to a decreased expression of MTFMT), Leigh syndrome, and developmental delay. However, there is significant phenotypic variation between patients, which is not uncommon in mitochondrial disease. Though the variation was not clearly elucidated through analysis of gene expression, this data supported two potential gene modifiers as well as proposed an alternative energy producing pathway in the cell—glutamine metabolism. This nonsynonymous mutation at site c.626C>T generates a splicing suppressor in the coding region on exon 4 resulting exon skipping in almost all transcripts in homozygotes during splicing. It is hypothesized that antisense oligotherapy will be effective in rescuing this mutation by inhibiting the splice silencer and promoting exon inclusion as well as an increased expression of MTFMT protein in affected patients. Patient fibroblast cells were treated with MTFMT Oligo 3, which was shown to be promising in previous experiments. Real-Time qPCR was used to measure mRNA expression showing a significant up-regulation of wild-type MTFMT with treatment. In order to test whether this therapy increases mitochondrial function as well, three mitochondrial functional assays measuring superoxide species in the mitochondria, the mitochondrial membrane potential, and calcium uptake in the mitochondria were tested for optimization of results. Success has been shown in the measurement of superoxide species and mitochondrial membrane potential in patient cells without treatment. Oligotherapy will hopefully be considered as a viable therapeutic option in the future as further testing is conducted and perfected.
ContributorsMoskowitz, Abby Mae (Author) / Huentelman, Matt (Thesis director) / Schrauwen, Isabelle (Committee member) / Rangasamy, Sampath (Committee member) / School of Human Evolution and Social Change (Contributor) / School of Molecular Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
2015 marks the deadline for the UN Millennium Development Goal 5 to reduce global maternal mortality rate (MMR) by 75% since 1990. As of 2015, MMR has only been reduced by 45%. Many international organizations claim that more medically trained midwives can meet global maternal health care needs. This study investigates two major questions. What is the role of midwives in diverse international maternal healthcare contexts? How do midwives in these different contexts define their roles and the barriers to providing the best care for women? From May to August 2015, I conducted over 70 interviews with midwives in Netherlands, Sweden, Rwanda, Bangladesh, Australia and Guatemala, interviewing between 6 and 13 midwives from each country. The majority of midwives defined their roles as supporting women's individual capacities and power through normal birth, and knowing when to refer when high-risk complications arise. Although thematic barriers vary by country, midwives in all countries believed that maternal healthcare can be improved by increased collaboration between midwives and other health care professionals, better access to culturally appropriate services, and greater public awareness of the role of midwives.
ContributorsCarson, Anna Elizabeth (Author) / Hruschka, Daniel (Thesis director) / Maupin, Jonathan (Committee member) / School of International Letters and Cultures (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
The purpose of this project was to document and explain what and why the 2014 School of Human Evolution and Social Change study abroad group experienced what they did in Fiji. Fiji is a third world country and it lacks important infrastructure that prevents many in Fiji form accessing basic medical supplies and medical treatment. Lack of infrastructure and, therefore, medical access and supplies is a result of the tumultuous ethnopolitical atmosphere that prevails in Fiji. Living with the Fijian locals in Votua Village made their struggle personal to the study abroad group. As a result, the group returned inspired to US determined to make an impact on the people that had made such a lasting impact on them. A new campus organization was created and nearly $4,600 was raised in order to help provide medical aid to the villagers in Fiji. The student's reaction in Fiji was westernized, but the program is not a complete and utter failure; students work directly with the villagers to acquire items they actually need. This ensures little waste and that the money collected is used efficiently. However, the student's project is not entirely sustainable; the implementation of the Funds For Fiji response has the potential to create lasting, unintended consequences. To make the program more sustainable, students need to figure out a way to broaden project involvement and to broaden the scope of the project to impact more people on the island of Fiji. Video Link https://youtu.be/9asWtj1u2BQ
ContributorsHowell, Colby Lee (Author) / Wetmore, Jameson (Thesis director) / Eder, James (Committee member) / School of Sustainability (Contributor) / School of Historical, Philosophical and Religious Studies (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2015-12
Description
Advances in peptide microarray technology have allowed for the creation of fast-paced and modular experiments within affinity ligand discovery. Previously, low density peptide arrays of 10,000 peptides were used to identify low affinity peptide ligands for a target protein; an approach that can be subsequently improved upon with a number of techniques. VDAP[a] offers more information about the relative affinity of protein-peptide interactions via signal intensity in contrast to high throughput screening (HTS) and display technologies which offer binary data. Now, high density peptide arrays with 130,000 to 330,000 peptides are available that allow screening across peptide libraries of greater diversity. With this increase in scale and diversity, faster analytical tools are needed to adequately characterize array data. Using the statistical power available in the R programming language, we have created a flexible analysis package that efficiently processes high density peptide array data from a variety of layouts, rank existing peptide hits, and utilize signal intensity data to generate new hits. This analysis provides a user-friendly method to efficiently analyze high density peptide array data, generate peptide leads for targeted therapeutic development, and further improve peptide array technologies.
ContributorsMoore, Cody Allen (Author) / Woodbury, Neal (Thesis director) / Diehnelt, Chris (Committee member) / Barrett, The Honors College (Contributor)
Created2015-12