Matching Items (57)
Description
The Cape Floral Region (CFR) in southwestern South Africa is one of the most diverse in the world, with >9,000 plant species, 70% of which are endemic, in an area of only ~90,000 km2. Many have suggested that the CFR's heterogeneous environment, with respect to landscape gradients, vegetation, rainfall, elevation, and soil fertility, is responsible for the origin and maintenance of this biodiversity. While studies have struggled to link species diversity with these features, no study has attempted to associate patterns of gene flow with environmental data to determine how CFR biodiversity evolves on different scales. Here, a molecular population genetic data is presented for a widespread CFR plant, Leucadendron salignum, across 51 locations with 5-kb of chloroplast (cpDNA) and 6-kb of unlinked nuclear (nuDNA) DNA sequences in a dataset of 305 individuals. In the cpDNA dataset, significant genetic structure was found to vary on temporal and spatial scales, separating Western and Eastern Capes - the latter of which appears to be recently derived from the former - with the highest diversity in the heart of the CFR in a central region. A second study applied a statistical model using vegetation and soil composition and found fine-scale genetic divergence is better explained by this landscape resistance model than a geographic distance model. Finally, a third analysis contrasted cpDNA and nuDNA datasets, and revealed very little geographic structure in the latter, suggesting that seed and pollen dispersal can have different evolutionary genetic histories of gene flow on even small CFR scales. These three studies together caution that different genomic markers need to be considered when modeling the geographic and temporal origin of CFR groups. From a greater perspective, the results here are consistent with the hypothesis that landscape heterogeneity is one driving influence in limiting gene flow across the CFR that can lead to species diversity on fine-scales. Nonetheless, while this pattern may be true of the widespread L. salignum, the extension of this approach is now warranted for other CFR species with varying ranges and dispersal mechanisms to determine how universal these patterns of landscape genetic diversity are.
ContributorsTassone, Erica (Author) / Verrelli, Brian C (Thesis advisor) / Dowling, Thomas (Committee member) / Cartwright, Reed (Committee member) / Rosenberg, Michael S. (Committee member) / Wojciechowski, Martin (Committee member) / Arizona State University (Publisher)
Created2013
Description
Understanding the properties and formation histories of individual stars in galaxies remains one of the most important areas in astrophysics. The impact of the Hubble Space Telescope<\italic> (HST<\italic>) has been revolutionary, providing deep observations of nearby galaxies at high resolution and unprecedented sensitivity over a wavelength range from near-ultraviolet to near-infrared. In this study, I use deep HST<\italic> imaging observations of three nearby star-forming galaxies (M83, NGC 4214, and CGCG 269-049) based on the HST<\italic> observations, in order to provide to construct color-magnitude and color-color diagrams of their resolved stellar populations. First, I select 50 regions in the spiral arm and inter-arm areas of M83, and determine the age distribution of the luminous stellar populations in each region. I developed an innovative method of star-by-star correction for internal extinction to improve stellar age and mass estimates. I compare the extinction-corrected ages of the 50 regions with those determined from several independent methods. The young stars are much more likely to be found in concentrated aggregates along spiral arms, while older stars are more dispersed. These results are consistent with a scenario where star formation is associated with the spiral arms, and stars form primarily in star clusters before dispersing on short timescales to form the field population. I address the effects of spatial resolution on the measured colors, magnitudes, and age estimates. While individual stars can occasionally show measurable differences in the colors and magnitudes, the age estimates for entire regions are only slightly affected. The same procedure is applied to nearby starbursting dwarf NGC 4214 to study the distributions of young and old stellar populations. Lastly, I describe the analysis of the HST<\italic> and Spitzer Space Telescope<\italic> observations of the extremely metal-poor dwarf galaxy (XMPG) CGCG 269-049 at a distance of 4.96 Mpc. This galaxy is one of the most metal-poor known with 12+log(O/H)=7.43. I find clear evidence for the presence of an old stellar population in CGCG~269-049, ruling out the possibility that this galaxy is forming its first generation of stars, as originally proposed for XMPGs. This comprehensive study of resolved stellar populations in three nearby galaxies provides detailed view of the current state of star formation and evolution of galaxies.
ContributorsKim, Hwihyun (Author) / Windhorst, Rogier A (Thesis advisor) / Jansen, Rolf A (Committee member) / Rhoads, James E (Committee member) / Scannapieco, Evan (Committee member) / Young, Patrick (Committee member) / Arizona State University (Publisher)
Created2012
Description
In this thesis, we present the study of several physical properties of relativistic mat- ters under extreme conditions. We start by deriving the rate of the nonleptonic weak processes and the bulk viscosity in several spin-one color superconducting phases of quark matter. We also calculate the bulk viscosity in the nonlinear and anharmonic regime in the normal phase of strange quark matter. We point out several qualitative effects due to the anharmonicity, although quantitatively they appear to be relatively small. In the corresponding study, we take into account the interplay between the non- leptonic and semileptonic weak processes. The results can be important in order to relate accessible observables of compact stars to their internal composition. We also use quantum field theoretical methods to study the transport properties in monolayer graphene in a strong magnetic field. The corresponding quasi-relativistic system re- veals an anomalous quantum Hall effect, whose features are directly connected with the spontaneous flavor symmetry breaking. We study the microscopic origin of Fara- day rotation and magneto-optical transmission in graphene and show that their main features are in agreement with the experimental data.
ContributorsWang, Xinyang, Ph.D (Author) / Shovkovy, Igor (Thesis advisor) / Belitsky, Andrei (Committee member) / Easson, Damien (Committee member) / Peng, Xihong (Committee member) / Vachaspati, Tanmay (Committee member) / Arizona State University (Publisher)
Created2013
Description
Quasars, the visible phenomena associated with the active accretion phase of super- massive black holes found in the centers of galaxies, represent one of the most energetic processes in the Universe. As matter falls into the central black hole, it is accelerated and collisionally heated, and the radiation emitted can outshine the combined light of all the stars in the host galaxy. Studies of quasar host galaxies at ultraviolet to near-infrared wavelengths are fundamentally limited by the precision with which the light from the central quasar accretion can be disentangled from the light of stars in the surrounding host galaxy. In this Dissertation, I discuss direct imaging of quasar host galaxies at redshifts z ≃ 2 and z ≃ 6 using new data obtained with the Hubble Space Telescope. I describe a new method for removing the point source flux using Markov Chain Monte Carlo parameter estimation and simultaneous modeling of the point source and host galaxy. I then discuss applications of this method to understanding the physical properties of high-redshift quasar host galaxies including their structures, luminosities, sizes, and colors, and inferred stellar population properties such as age, mass, and dust content.
ContributorsMechtley, Matt R (Author) / Windhorst, Rogier A (Thesis advisor) / Butler, Nathaniel (Committee member) / Jansen, Rolf A (Committee member) / Rhoads, James (Committee member) / Scowen, Paul (Committee member) / Arizona State University (Publisher)
Created2014
Description
A thorough exploration of star formation necessitates observation across the electromagnetic spectrum. In particular, observations in the submillimeter and ultra-violet allow one to observe very early stage star formation and to trace the evolution from molecular cloud collapse to stellar ignition. Submillimeter observations are essential for piercing the heart of heavily obscured stellar nurseries to observe star formation in its infancy. Ultra-violet observations allow one to observe stars just after they emerge from their surrounding environment, allowing higher energy radiation to escape. To make detailed observations of early stage star formation in both spectral regimes requires state-of-the-art detector technology and instrumentation. In this dissertation, I discuss the calibration and feasibility of detectors developed by Lawrence Berkeley National Laboratory and specially processed at the Jet Propulsion Laboratory to increase their quantum efficiency at far-ultraviolet wavelengths. A cursory treatment of the delta-doping process is presented, followed by a thorough discussion of calibration procedures developed at JPL and in the Laboratory for Astronomical and Space Instrumentation at ASU. Subsequent discussion turns to a novel design for a Modular Imager Cell forming one possible basis for construction of future large focal plane arrays. I then discuss the design, fabrication, and calibration of a sounding rocket imaging system developed using the MIC and these specially processed detectors. Finally, I discuss one scientific application of sub-mm observations. I used data from the Heinrich Hertz Sub-millimeter Telescope and the Sub-Millimeter Array (SMA) to observe sub-millimeter transitions and continuum emission towards AFGL 2591. I tested the use of vibrationally excited HCN emission to probe the protostellar accretion disk structure. I measured vibrationally excited HCN line ratios in order to elucidate the appropriate excitation mechanism. I find collisional excitation to be dominant, showing the emission originates in extremely dense (n&sim10;11 cm-3), warm (T&sim1000; K) gas. Furthermore, from the line profile of the v=(0, 22d, 0) transition, I find evidence for a possible accretion disk.
ContributorsVeach, Todd Justin (Author) / Scowen, Paul A (Thesis advisor) / Groppi, Christopher E (Thesis advisor) / Beasley, Matthew N (Committee member) / Rhoads, James E (Committee member) / Windhorst, Rogier A (Committee member) / Arizona State University (Publisher)
Created2012
Description
Numerical simulations are very helpful in understanding the physics of the formation of structure and galaxies. However, it is sometimes difficult to interpret model data with respect to observations, partly due to the difficulties and background noise inherent to observation. The goal, here, is to attempt to bridge this gap between simulation and observation by rendering the model output in image format which is then processed by tools commonly used in observational astronomy. Images are synthesized in various filters by folding the output of cosmological simulations of gasdynamics with star-formation and dark matter with the Bruzual- Charlot stellar population synthesis models. A variation of the Virgo-Gadget numerical simulation code is used with the hybrid gas and stellar formation models of Springel and Hernquist (2003). Outputs taken at various redshifts are stacked to create a synthetic view of the simulated star clusters. Source Extractor (SExtractor) is used to find groupings of stellar populations which are considered as galaxies or galaxy building blocks and photometry used to estimate the rest frame luminosities and distribution functions. With further refinements, this is expected to provide support for missions such as JWST, as well as to probe what additional physics are needed to model the data. The results show good agreement in many respects with observed properties of the galaxy luminosity function (LF) over a wide range of high redshifts. In particular, the slope (alpha) when fitted to the standard Schechter function shows excellent agreement both in value and evolution with redshift, when compared with observation. Discrepancies of other properties with observation are seen to be a result of limitations of the simulation and additional feedback mechanisms which are needed.
ContributorsMorgan, Robert (Author) / Windhorst, Rogier A (Thesis advisor) / Scannapieco, Evan (Committee member) / Rhoads, James (Committee member) / Gardner, Carl (Committee member) / Belitsky, Andrei (Committee member) / Arizona State University (Publisher)
Created2012
Description
Understanding the temperature structure of protoplanetary disks (PPDs) is paramount to modeling disk evolution and future planet formation. PPDs around T Tauri stars have two primary heating sources, protostellar irradiation, which depends on the flaring of the disk, and accretional heating as viscous coupling between annuli dissipate energy. I have written a "1.5-D" radiative transfer code to calculate disk temperatures assuming hydrostatic and radiative equilibrium. The model solves for the temperature at all locations simultaneously using Rybicki's method, converges rapidly at high optical depth, and retains full frequency dependence. The likely cause of accretional heating in PPDs is the magnetorotational instability (MRI), which acts where gas ionization is sufficiently high for gas to couple to the magnetic field. This will occur in surface layers of the disk, leaving the interior portions of the disk inactive ("dead zone"). I calculate temperatures in PPDs undergoing such "layered accretion." Since the accretional heating is concentrated far from the midplane, temperatures in the disk's interior are lower than in PPDs modeled with vertically uniform accretion. The method is used to study for the first time disks evolving via the magnetorotational instability, which operates primarily in surface layers. I find that temperatures in layered accretion disks do not significantly differ from those of "passive disks," where no accretional heating exists. Emergent spectra are insensitive to active layer thickness, making it difficult to observationally identify disks undergoing layered vs. uniform accretion. I also calculate the ionization chemistry in PPDs, using an ionization network including multiple charge states of dust grains. Combined with a criterion for the onset of the MRI, I calculate where the MRI can be initiated and the extent of dead zones in PPDs. After accounting for feedback between temperature and active layer thickness, I find the surface density of the actively accreting layers falls rapidly with distance from the protostar, leading to a net outward flow of mass from ~0.1 to 3 AU. The clearing out of the innermost zones is possibly consistent with the observed behavior of recently discovered "transition disks."
ContributorsLesniak, Michael V., III (Author) / Desch, Steven J. (Thesis advisor) / Scannapieco, Evan (Committee member) / Timmes, Francis (Committee member) / Starrfield, Sumner (Committee member) / Belitsky, Andrei (Committee member) / Arizona State University (Publisher)
Created2012
Description
This thesis deals with the first measurements done with a cold neutron beam at the Spallation Neutron Source at Oak Ridge National Laboratory. The experimental technique consisted of capturing polarized cold neutrons by nuclei to measure parity-violation in the angular distribution of the gamma rays following neutron capture. The measurements presented here for the nuclei Chlorine ( 35Cl) and Aluminum ( 27Al ) are part of a program with the ultimate goal of measuring the asymmetry in the angular distribution of gamma rays emitted in the capture of neutrons on protons, with a precision better than 10-8, in order to extract the weak hadronic coupling constant due to pion exchange interaction with isospin change equal with one ( hπ 1). Based on theoretical calculations asymmetry in the angular distribution of the gamma rays from neutron capture on protons has an estimated size of 5·10-8. This implies that the Al parity violation asymmetry and its uncertainty have to be known with a precision smaller than 4·10-8. The proton target is liquid Hydrogen (H2) contained in an Aluminum vessel. Results are presented for parity violation and parity-conserving asymmetries in Chlorine and Aluminum. The systematic and statistical uncertainties in the calculation of the parity-violating and parity-conserving asymmetries are discussed.
ContributorsBalascuta, Septimiu (Author) / Alarcon, Ricardo (Thesis advisor) / Belitsky, Andrei (Committee member) / Doak, Bruce (Committee member) / Comfort, Joseph (Committee member) / Schmidt, Kevin (Committee member) / Arizona State University (Publisher)
Created2012
Description
Triops (Branchiopoda: Notostraca) and Streptocephalus (Branchiopoda: Anostraca) are two crustaceans which cohabitate in ephemeral freshwater pools. They both lay desiccation resistant eggs that disperse passively to new hydrologically isolated environments. The extent of genetic distance among regions and populations is of perennial interest in animals that live in such isolated habitats. Populations in six natural ephemeral pool habitats located in two different regions of the Sonoran Desert and a transition area between the Sonoran and Chihuahuan Deserts were sampled. Sequences from Genbank were used for reference points in the determination of species as well as to further identify regional genetic distance within species. This study estimated the amount of within and between genetic distance of individuals from each region and population through the use of a neutral marker, cytochrome oxidase I (COI). We concluded that, although the method of passive dispersal may differ between the two genera, the differences do not results in different patterns of genetic distances between regions and populations. Furthermore, we only found the putative species, Triops longicaudatus "short", with enough distinct speciation. Although Triops longicaudatus "long" and Triops newberryi may be in the early stages of speciation, this study does not find enough support to conclude that they have separated.
ContributorsMurphy Jr., Patrick Joseph (Author) / Rutowski, Ronald (Thesis director) / Cartwright, Reed (Committee member) / Lessios, Nikos (Committee member) / School of Life Sciences (Contributor) / School of Human Evolution and Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2016-05
Description
The evolution of blindness in cave animals has been heavily studied; however, little research has been done on the interaction of migration and drift on the development of blindness in these populations. In this study, a model is used to compare the effect that genetic drift has on the fixation of a blindness allele for varying amounts of migration and selection. For populations where the initial frequency is quite low, genetic drift plays a much larger role in the fixation of blindness than populations where the initial frequency is high. In populations where the initial frequency is high, genetic drift plays almost no role in fixation. Our results suggest that migration plays a greater role in the fate of the blindness allele than selection.
ContributorsMerry, Alexandra Leigh (Author) / Cartwright, Reed (Thesis director) / Rosenberg, Michael (Committee member) / Schwartz, Rachel (Committee member) / Barrett, The Honors College (Contributor) / School of Life Sciences (Contributor)
Created2014-05