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- All Subjects: Paleopathology
- Creators: Kumar, Sudhir
- Creators: Norris, Annie Laurie
- Member of: ASU Electronic Theses and Dissertations
Description
Studies of ancient pathogens are moving beyond simple confirmatory analysis of diseased bone; bioarchaeologists and ancient geneticists are posing nuanced questions and utilizing novel methods capable of confronting the debates surrounding pathogen origins and evolution, and the relationships between humans and disease in the past. This dissertation examines two ancient human diseases through molecular and bioarchaeological lines of evidence, relying on techniques in paleogenetics and phylogenetics to detect, isolate, sequence and analyze ancient and modern pathogen DNA within an evolutionary framework. Specifically this research addresses outstanding issues regarding a) the evolution, origin and phylogenetic placement of the pathogen causing skeletal tuberculosis in New World prior to European contact, and b) the phylogeny and origins of the parasite causing the human leishmaniasis disease complex. An additional chapter presents a review of the major technological and theoretical advances in ancient pathogen genomics to frame the contributions of this work within a rapidly developing field. This overview emphasizes that understanding the evolution of human disease is critical to contextualizing relationships between humans and pathogens, and the epidemiological shifts observed both in the past and in the present era of (re)emerging infectious diseases. These questions continue to be at the forefront of not only pathogen research, but also
bioarchaeological and paleopathological scholarship.
bioarchaeological and paleopathological scholarship.
ContributorsHarkins, Kelly M (Author) / Buikstra, Jane E. (Thesis advisor) / Stone, Anne C (Thesis advisor) / Knudson, Kelly (Committee member) / Kumar, Sudhir (Committee member) / Krause, Johannes (Committee member) / Arizona State University (Publisher)
Created2014
Description
This dissertation examines the interrelationships between stress, frailty, growth, mortality, and diet at the Qinifab School site, Sudan, using a combination of osteological, paleopathological, and biogeochemical methods. The skeletal sample, from the fourth cataract region of Nubia, is comprised of 100 individuals from a Late Meroitic to Christian period (~250-1400 CE) cemetery. Standard osteological methods were used to estimate age and sex, and measurements were taken to assess body dimensions. Preadults were aged by dental and skeletal development, producing two independent ages to categorize individuals as developmentally “normal” or “delayed.” Data were collected on nonspecific indicators of stress, including linear enamel hypoplasias (LEHs), porotic hyperostosis (PH), and cribra orbitalia (CO). In preadults, these were compared to World Health Organization (WHO) growth standards to identify individuals who experienced stunting or wasting. For all ages, evidence of stress was compared with age at death and growth/body size. Finally, stable carbon and nitrogen isotope analyses were conducted on bone collagen and carbonate samples from a representative sample of 60 individuals, of which 46 collagen samples and all carbonates had acceptable preservation.“Delayed” preadults generally showed reduced body size relative to “normal” individuals, they were more likely to be stunted, and their growth trajectories were less similar to WHO standards. However, childhood stress had little impact on adult body size. CO occurred at higher frequencies in preadults and individuals with mixed/active lesions died at younger ages. PH rarely developed before age 6 but was present in most individuals over that age. Individuals with earlier formed LEHs tended to experience more stress overall and die younger. Active/mixed CO was associated with stunting in preadults and reduced brachial index in adults.
A greater proportion of individuals in the Christian period were affected by CO compared to the Post-Meroitic. A temporal shift also occurred in diet between the Post-Meroitic and Christian periods based upon the δ13CCOLL and δ15NCOLL values. Lower δ15N and the greater difference in δ13CAP-COLL suggest a shift toward intensified agriculture and decreased use of animal products and a potential dietary etiology for the increase in CO.
ContributorsNorris, Annie Laurie (Author) / Baker, Brenda J (Thesis advisor) / Knudson, Kelly (Committee member) / Dupras, Tosha (Committee member) / Arizona State University (Publisher)
Created2021