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- All Subjects: Ecology
- Creators: Makings, Elizabeth
- Creators: Angilletta, Michael
Description
I am evaluating the genomic basis of a model of heat tolerance in which organisms succumb to warming when their demand for oxygen exceeds their supply. This model predicts that tolerance of hypoxia should correlate genetically with tolerance of heat. To evaluate this prediction, I tested heat and hypoxia tolerance in several genetic lines of Drosophila melanogaster. I hypothesized that genotypes that can fly better at high temperatures are also able to fly well at hypoxia. Genotypes from the Drosophila Genetic Reference Panel (DGRP) were assessed for flight at hypoxia and normal temperature (12% O2 and 25°C) as well as normoxia and high temperature (21% O2 and 39°C). After testing 66 lines from the DGRP, the oxygen- and capacity-limited thermal tolerance theory is supported; hypoxia-resistant lines are more likely to be heat-resistant. This supports previous research, which suggested an interaction between the tolerance of the two environmental variables. I used this data to perform a genome-wide association study to find specific single-nucleotide polymorphisms associated with heat tolerance and hypoxia tolerance but found no specific genomic markers. Understanding factors that limit an organism’s stress tolerance as well as the regions of the genome that dictate this phenotype should enable us to predict how organisms may respond to the growing threat of climate change.
ContributorsFredette-Roman, Jacob Daniel (Author) / Angilletta, Michael (Thesis director) / VandenBrooks, John (Committee member) / Youngblood, Jacob (Committee member) / School of Life Sciences (Contributor, Contributor) / Barrett, The Honors College (Contributor)
Created2020-05
Description
Ectotherms rely on external heat to attain target body temperatures which can vary based on the animal’s current physiological activity. Many ectotherms become thermophilic (“heat-loving”) during crucial physiological processes like digestion and reproduction, behaviorally thermoregulating to increase body temperature higher than what they otherwise prefer. However, there is a positive relationship between body temperature and water loss that dictates increasing body temperature typically elicits an increase in water loss. Animals that inhabit areas where water is at least seasonally limited (e.g., deserts, wet-dry forests) may face a tradeoff between prioritizing behavioral thermophily to optimize physiological processes versus prioritizing water balance and potentially sacrificing some aspect of total performance capability.It is thus far unknown how reduced water availability and subsequent dehydration may influence thermophily in ectotherms. I hypothesized that behaviorally thermoregulating ectotherms exhibit thermophily during critical physiological events, and the extent to which thermophily is expressed is influenced by the animal’s hydric state. Using Children’s pythons (Antaresia childreni), I investigated the effects of dehydration on behavioral thermophily during digestion and reproduction. I found that dehydration caused a suppression in digestion-associated thermophily, where dehydrated snakes returned to pre-feeding body temperature sooner than they did when they were hydrated. In contrast, water deprivation at different reproductive stages had no effect on thermophily despite leading to a significant increase in the female’s plasma osmolality.
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Additionally, the timing of water deprivation during reproduction had differing effects on plasma osmolality and circulating triglyceride, total protein, and corticosterone concentrations. My research provides evidence of the sensitive and complex dynamic between body temperature, water balance, and physiological processes. At a time when many dry ecosystems are becoming hotter and drier, my investigation of dehydration and its influence on thermal dynamics and physiological metrics provides insight into cryptic effects on the vital processes of digestion and reproduction.
ContributorsAzzolini, Jill L. (Author) / Denardo, Dale F. (Thesis advisor) / John-Alder, Henry (Committee member) / Angilletta, Michael (Committee member) / Pratt, Stephen (Committee member) / Arizona State University (Publisher)
Created2023
Description
The nests of the Curve-billed Thrasher (Toxostoma curvirostre) were studied across the greater Phoenix area from 2020-2022 in order to assess any significant relationships between their composition and the composition of their environment. Nests were collected and measured, and the vegetation was surveyed to 100 m for potential nest material type. In the lab, nests were separated by material type and tallied. The dense cores of the nests received a 100-piece sampling, with the first hundred pieces plucked from the structure, sorted by type, and massed. Ordinary least squares (OLS) and binomial regression analyses were performed on the body tallies and their corresponding site tallies. Core material weights and their corresponding site tallies only received OLS regression analyses. Beta regression analyses were also performed on the mass proportions of core samples and their corresponding environmental tallies. OLS regression yielded a significant relationship between the spiny body material tally and its site tallies at 25 and 100 m. While failing the assumption of normality, the tally of barrel cactus in a nest body yielded significant p-values in OLS and binomial regression, as well as the Spearman’s correlation test, supporting a strong correlation with the 100m site tally. The tally of anthropogenic materials and the distance to the nearest man-made structure failed the test of normality, but yielded significant p-values in binomial regression and the Spearman’s correlation test. OLS regression of log anthropogenic tally and log distance to nearest structure failed normality but yielded a significant p-value as well. In beta regression analyses, only the spiny core mass proportion yielded a significant relationship at the 100 m site tally.
ContributorsMotta, Anthony Joseph (Author) / Taylor, Jay (Thesis advisor) / Makings, Elizabeth (Committee member) / Puente, Raul (Committee member) / Arizona State University (Publisher)
Created2022
Description
By increasing the mean and variance of environmental temperatures, climate change has caused local extinctions and range shifts of numerous species. However, biologists disagree on which populations and species are most vulnerable to future warming. This debate arises because biologists do not know which physiological processes are most vulnerable to temperature or how to model these processes in complex environments. Using the South American locust (Schistocerca cancellata) as a model system, my dissertation addressed this debate and explained how climate limits the persistence of locust populations. Locusts of S. cancellata are serious agricultural pests with occasional outbreaks covering up to 4 million km2 over six countries. Because outbreaks are largely driven by climate, understanding how climate limits the persistence of locusts may help predict crop losses in future climates. To achieve this aim, I integrated observational, experimental, and computational approaches. First, I tested a physiological model of heat stress. By measuring the heat tolerance of locusts under different oxygen concentrations, I demonstrated that heat tolerance depends on oxygen supply during the hatchling stage only. Second, I modeled the geographic distribution of locusts using physiological traits. I started by measuring thermal effects on consumption and defecation of field-captured locusts, and I then used these data to model energy gain in current and future climates. My results indicated that incorporating physiological mechanisms can improve the accuracy of models and alter predicted impacts of climate change. Finally, I explored the causes and consequences of intraspecific variation in heat tolerance. After measuring heat tolerance of locusts in different hydration states and developmental stages, I modeled survival in historical microclimates. My models indicated that recent climate change has amplified the risk of overheating for locusts, and this risk depended strongly on shade availability, hydration state, and developmental stage. Therefore, the survival of locusts in future climates will likely depend on their access to shade and water. Overall, my dissertation argues that modeling physiological mechanisms can improve the ability of biologists to predict the impacts of climate change.
ContributorsYoungblood, Jacob (Author) / Angilletta, Michael (Thesis advisor) / Buckley, Lauren (Committee member) / Cease, Arianne (Committee member) / Smith, Brian (Committee member) / Vanden Brooks, John (Committee member) / Arizona State University (Publisher)
Created2022
Description
Understanding the effects of fire on the Sonoran Desert is of critical importance as rising temperatures and changing weather patterns increase the frequency and size of wildfires. Seed banks are an important component in post-fire landscape recovery as the seeds that remain in the soil are an indicator of a landscape’s future trajectory. The purpose of this study is to determine the lasting impacts of fire on the soil seed bank of the Sonoran Desert and to identify potential concerns affecting post-fire recovery and restoration. The study site was located in the Arizona Upland division of the Sonoran Desert, Arizona, United States. Soil samples were collected from five burned sites with increasing time since fire, and five nearby unburned sites used as a control. A seedling emergence test was conducted to investigate the density and richness of the seed bank of burned and unburned sites. Seed densities and species richness for sites were calculated using germination results. Findings were analyzed using non-parametric analyses comparing changes in burned and unburned sites over time.
Results found that burn status and time since fire had no significant impact on seed density. Graminoid and forb densities were statistically consistent across burn status and time since fire. While species richness was consistent across both plot types, burned samples typically had fewer species than unburned samples. Burned and unburned plots revealed a dominance of annual species with limited presence of woody perennials. While seed densities and species richness are relatively unchanged across burned and unburned sites over time, the lack of woody perennials in the seed bank raises concerns about landscape recovery trajectories in burned sites. These results suggest that restoration efforts focused on maintaining the presence of woody trees and shrubs in the landscape may have the most impact.
ContributorsCountryman, Kristen (Author) / Makings, Elizabeth (Thesis advisor) / Pigg, Kathleen (Thesis advisor) / Lata, Mary (Committee member) / Arizona State University (Publisher)
Created2023
Description
Urban wetland ecosystems provide myriad ecosystem services and are shaped by diverse social and ecological factors. In rapidly urbanizing parts of the desert Southwest, wetlands are especially vital. Across less than 60 km as it enters the Phoenix area, the Salt River is dammed, diverted, re-filled, clear-cut, restored, and ignored. This study documents how animal and plant communities in three perennially inundated reaches of the river changed over a decade under different social-ecological pressures. One wetland in the urban core is restored, another formed accidentally by human infrastructure, and the last is managed on the urban periphery. Surveys conducted since 2012 used point-count surveys to assess bird communities and visual encounter surveys to assess reptiles and amphibians. Plant communities were surveyed in 2012 and 2022 using cover classes. Between 2012 and 2022, accidental and restored wetlands close to the urban core displayed an increase in plant abundance, largely consisting of introduced species. While all sites saw an increase in plant species considered invasive by land management groups, both urban wetlands saw an increase in regionally native species, including plants that are culturally significant to local Indigenous groups. Reptile communities declined in richness and abundance in both urban sites, but birds grew in abundance and richness at the urban restored site while not changing at the urban accidental wetland. The non-urban site saw stable populations of both birds and herpetofauna. These trends in biotic communities reveal ecological tradeoffs under different management strategies for urban wetlands. These findings also create a portrait of wetland communities along a rapidly urbanizing arid river. As the Salt River watershed becomes more urbanized, it is important to establish a more empathetic and informed relationship between its plant and animal—including human—residents. To this end, these data were incorporated in a series of handmade paper artworks, crafted from the most abundant wetland plant species found at the study sites, harvested alongside local land management efforts. These artworks examine the potential of four common cosmopolitan wetland plants for papermaking, revealing the potential to align ecosystem management efforts with both materials production and fine arts. By using relief printmaking to visualize long-term ecological data, I explored an alternative, more creative and embodied way to engage with and visualize urban wetland communities. This alternate mode of engagement can complement ecological management and research to diversify disciplines and participants engaged with understanding and living alongside urban wetlands.
ContributorsRamsey-Wiegmann, Luke Dawson (Author) / Childers, Daniel L (Thesis advisor) / Makings, Elizabeth (Committee member) / Bateman, Heather (Committee member) / Arizona State University (Publisher)
Created2023
Description
Stream flow permanence plays a critical role in determining floristic composition, abundance, and diversity in the Sonoran Desert, but questions remain about the effects of stream flow permanence on butterfly composition, abundance, and diversity. Understanding the effects of flow permanence on butterflies and relevant subsets of butterflies (such as butterflies whose host plants are present) and comparing them to these same effects on plants and relevant subsets of plants (such as butterfly nectar plants and larval host plants) provided insight into pollinator and riparian conservation and restoration.
I surveyed four Sonoran desert stream sites, and found significant relationships between flow permanence and plant and butterfly species richness and abundance, as well as strong relationships between plant and butterfly abundance and between plant and butterfly species richness. Most notably, my results pointed to hosted butterflies as a break-out category of butterflies which may more clearly delineate ecological relationships between butterfly and plant abundance and diversity along Sonoran Desert streams; this can inform conservation decisions. Managing for hosted (resident) butterflies will necessarily entail managing for the presence of surface water, nectar forage, varying levels of canopy cover, and plant, nectar plant, and host plant diversity since the relationships between hosted butterfly species richness and/or abundance and all of these variables were significant, both statistically and ecologically.
I surveyed four Sonoran desert stream sites, and found significant relationships between flow permanence and plant and butterfly species richness and abundance, as well as strong relationships between plant and butterfly abundance and between plant and butterfly species richness. Most notably, my results pointed to hosted butterflies as a break-out category of butterflies which may more clearly delineate ecological relationships between butterfly and plant abundance and diversity along Sonoran Desert streams; this can inform conservation decisions. Managing for hosted (resident) butterflies will necessarily entail managing for the presence of surface water, nectar forage, varying levels of canopy cover, and plant, nectar plant, and host plant diversity since the relationships between hosted butterfly species richness and/or abundance and all of these variables were significant, both statistically and ecologically.
ContributorsButler, Lane (Author) / Stromberg, Juliet C. (Thesis advisor) / Makings, Elizabeth (Committee member) / Pearson, David L (Committee member) / Boggess, May (Committee member) / Buchmann, Stephen (Committee member) / Arizona State University (Publisher)
Created2015
Description
The Upper Verde River of central Arizona flows through a landscape of complex geology at the meeting of seven biotic communities and three physiographic provinces. This has resulted in notably diverse flora and fauna and a hub of rare and endemic plant species. The river has sustained cultures since pre-history, however current regional water use is predicted to diminish streamflow over the next century. Prior to this project, no floristic inventory had been conducted along any section of the Verde. The purpose of this study was to develop a Flora of the Upper Verde River, with the goals of documenting rare and endemic species, the composition and abundance of wetland plants, and the factors shaping plant diversity in the region.
I made a total of 1856 collections and reviewed past collections to produce a checklist of 729 vascular plant taxa in 403 genera and 98 families. The most species-rich family is the Poaceae, followed by Asteraceae and Fabaceae. The flora includes 159 wetland taxa, 47 endemics, and 26 taxa of conservation concern, eight of which are Federally listed. Several new populations were found in these categories and of rarely-collected taxa including one state record, three county records and several range extensions. I report on the local status of several endemics, wetland taxa with limited distributions, and relict populations of a tepary bean (Phaseolus acutifolius) that were likely transported to the region and cultivated by pre-Columbian cultures. I categorize thirteen distinct plant communities, the most abundant being Pinyon/Juniper Woodland, Chihuahuan/Apacherian Scrub, and Riparian Deciduous Forest.
Four primary factors influence floristic diversity of the Upper Verde region: 1) a location at the junction of three physiographic and floristic provinces—represented by co-occurrence of species with affinities to the Sonoran, Intermountain and Madrean regions, 2) geologic diversity—as distinct groups of species are associated with particular geologic types, 3) topographic and habitat complexity—allowing species adapted to disparate environments to co-occur, and 4) human introductions—since over 15% of the flora is composed of introduced species from Eurasia and several taxa were introduced to the region and cultivated by pre-Columbian cultures.
I made a total of 1856 collections and reviewed past collections to produce a checklist of 729 vascular plant taxa in 403 genera and 98 families. The most species-rich family is the Poaceae, followed by Asteraceae and Fabaceae. The flora includes 159 wetland taxa, 47 endemics, and 26 taxa of conservation concern, eight of which are Federally listed. Several new populations were found in these categories and of rarely-collected taxa including one state record, three county records and several range extensions. I report on the local status of several endemics, wetland taxa with limited distributions, and relict populations of a tepary bean (Phaseolus acutifolius) that were likely transported to the region and cultivated by pre-Columbian cultures. I categorize thirteen distinct plant communities, the most abundant being Pinyon/Juniper Woodland, Chihuahuan/Apacherian Scrub, and Riparian Deciduous Forest.
Four primary factors influence floristic diversity of the Upper Verde region: 1) a location at the junction of three physiographic and floristic provinces—represented by co-occurrence of species with affinities to the Sonoran, Intermountain and Madrean regions, 2) geologic diversity—as distinct groups of species are associated with particular geologic types, 3) topographic and habitat complexity—allowing species adapted to disparate environments to co-occur, and 4) human introductions—since over 15% of the flora is composed of introduced species from Eurasia and several taxa were introduced to the region and cultivated by pre-Columbian cultures.
ContributorsCoburn, Francis S (Author) / Stromberg, Juliet C. (Thesis advisor) / Landrum, Leslie R (Thesis advisor) / Makings, Elizabeth (Committee member) / Fertig, Walter F (Committee member) / Arizona State University (Publisher)
Created2015
Description
It’s no secret that wetlands have dramatically declined in the arid and semiarid American West, yet the small number of wetlands that persist provide vital ecosystem services. Ciénega is a term that refers to a freshwater arid-land wetland. Today, even in areas where ciénegas are prominent they occupy less than 0.1% of the landscape. This investigation assesses the distribution of vascular plant species within and among ciénegas and address linkages between environmental factors and wetland plant communities. Specifically, I ask: 1) What is the range of variability among ciénegas, with respect to wetland area, soil organic matter, plant species richness, and species composition? 2) How is plant species richness influenced locally by soil moisture, soil salinity, and canopy cover, and regionally by elevation, flow gradient (percent slope), and temporally by season? And 3) Within ciénegas, how do soil moisture, soil salinity, and canopy cover influence plant species community composition? To answer these questions I measured environmental variables and quantified vegetation at six cienegas within the Santa Cruz Watershed in southern Arizona over one spring and two post-monsoon periods. Ciénegas are highly variable with respect to wetland area, soil organic matter, plant species richness, and species composition. Therefore, it is important to conserve the ciénega landscape as opposed to conserving a single ciénega. Plant species richness is influenced negatively by soil moisture, positively by soil salinity, elevation, and flow gradient (percent slope), and is greater during the post-monsoon season. Despite concerns about woody plant encroachment reducing biodiversity, my investigation suggests canopy cover has no significant influence on ciénega species richness. Plant species community composition is structured by water availability at all ciénegas, which is consistent with the key role water availability plays in arid and semiarid regions. Effects of canopy and salinity structuring community composition are site specific. My investigation has laid the groundwork for ciénega conservation by providing baseline information of the ecology of these unique and threatened systems. The high variability of ciénega wetlands and the rare species they harbor combined with the numerous threats against them and their isolated occurrences makes these vanishing communities high priority for conservation.
ContributorsWolkis, Dustin (Author) / Stromberg, Juliet C. (Thesis advisor) / Hall, Sharon (Committee member) / Salywon, Andrew (Committee member) / Makings, Elizabeth (Committee member) / Arizona State University (Publisher)
Created2016
Description
There is considerable recent interest in the dynamic nature of immune function in the context of an animal’s internal and external environment. An important focus within this field of ecoimmunology is on how availability of resources such as energy can alter immune function. Water is an additional resource that drives animal development, physiology, and behavior, yet the influence hydration has on immunity has received limited attention. In particular, hydration state may have the greatest potential to drive fluctuations in immunity and other physiological functions in species that live in water-limited environments where they may experience periods of dehydration. To shed light on the sensitivity of immune function to hydration state, I first tested the effect of hydration states (hydrated, dehydrated, and rehydrated) and digestive states on innate immunity in the Gila monster, a desert-dwelling lizard. Though dehydration is often thought to be stressful and, if experienced chronically, likely to decrease immune function, dehydration elicited an increase in immune response in this species, while digestive state had no effect. Next, I tested whether dehydration was indeed stressful, and tested a broader range of immune measures. My findings validated the enhanced innate immunity across additional measures and revealed that Gila monsters lacked a significant stress hormone response during dehydration (though results were suggestive). I next sought to test if life history (in terms of environmental stability) drives these differences in dehydration responses using a comparative approach. I compared four confamilial pairs of squamate species that varied in habitat type within each pair—four species that are adapted to xeric environments and four that are adapted to more mesic environments. No effect of life history was detected between groups, but hydration was a driver of some measures of innate immunity and of stress hormone concentrations in multiple species. Additionally, species that exhibited a stress response to dehydration did not have decreased innate immunity, suggesting these physiological responses may often be decoupled. My dissertation work provides new insight into the relationship between hydration, stress, and immunity, and it may inform future work exploring disease transmission or organismal responses to climate change.
ContributorsMoeller, Karla T (Author) / DeNardo, Dale (Thesis advisor) / Angilletta, Michael (Committee member) / French, Susannah (Committee member) / Rutowski, Ronald (Committee member) / Sabo, John (Committee member) / Arizona State University (Publisher)
Created2016