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Human activity has increased loading of reactive nitrogen (N) in the environment, with important and often deleterious impacts on biodiversity, climate, and human health. Since the fate of N in the ecosystem is mainly controlled by microorganisms, understanding the factors that shape microbial communities becomes relevant and urgent. In arid

Human activity has increased loading of reactive nitrogen (N) in the environment, with important and often deleterious impacts on biodiversity, climate, and human health. Since the fate of N in the ecosystem is mainly controlled by microorganisms, understanding the factors that shape microbial communities becomes relevant and urgent. In arid land soils, these microbial communities and factors are not well understood. I aimed to study the role of N cycling microbes, such as the ammonia-oxidizing bacteria (AOB), the recently discovered ammonia-oxidizing archaea (AOA), and various fungal groups, in soils of arid lands. I also tested if niche differentiation among microbial populations is a driver of differential biogeochemical outcomes. I found that N cycling microbial communities in arid lands are structured by environmental factors to a stronger degree than what is generally observed in mesic systems. For example, in biological soil crusts, temperature selected for AOA in warmer deserts and for AOB in colder deserts. Land-use change also affects niche differentiation, with fungi being the major agents of N2O production in natural arid lands, whereas emissions could be attributed to bacteria in mesic urban lawns. By contrast, NO3- production in the native desert and managed soils was mainly controlled by autotrophic microbes (i.e., AOB and AOA) rather than by heterotrophic fungi. I could also determine that AOA surprisingly responded positively to inorganic N availability in both short (one month) and long-term (seven years) experimental manipulations in an arid land soil, while environmental N enrichment in other ecosystem types is known to favor AOB over AOA. This work improves our predictions of ecosystem response to anthropogenic N increase and shows that paradigms derived from mesic systems are not always applicable to arid lands. My dissertation also highlights the unique ecology of ammonia oxidizers and draws attention to the importance of N cycling in desert soils.
ContributorsMarusenko, Yevgeniy (Author) / Hall, Sharon J (Thesis advisor) / Garcia-Pichel, Ferran (Thesis advisor) / Mclain, Jean E (Committee member) / Schwartz, Egbert (Committee member) / Arizona State University (Publisher)
Created2013
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The explicit role of soil organisms in shaping soil health, rates of pedogenesis, and resistance to erosion has only just recently begun to be explored in the last century. However, much of the research regarding soil biota and soil processes is centered on maintaining soil fertility (e.g., plant nutrient availability)

The explicit role of soil organisms in shaping soil health, rates of pedogenesis, and resistance to erosion has only just recently begun to be explored in the last century. However, much of the research regarding soil biota and soil processes is centered on maintaining soil fertility (e.g., plant nutrient availability) and soil structure in mesic- and agro- ecosystems. Despite the empirical and theoretical strides made in soil ecology over the last few decades, questions regarding ecosystem function and soil processes remain, especially for arid areas. Arid areas have unique ecosystem biogeochemistry, decomposition processes, and soil microbial responses to moisture inputs that deviate from predictions derived using data generated in more mesic systems. For example, current paradigm predicts that soil microbes will respond positively to increasing moisture inputs in a water-limited environment, yet data collected in arid regions are not congruent with this hypothesis. The influence of abiotic factors on litter decomposition rates (e.g., photodegradation), litter quality and availability, soil moisture pulse size, and resulting feedbacks on detrital food web structure must be explicitly considered for advancing our understanding of arid land ecology. However, empirical data coupling arid belowground food webs and ecosystem processes are lacking. My dissertation explores the resource controls (soil organic matter and soil moisture) on food web network structure, size, and presence/absence of expected belowground trophic groups across a variety of sites in Arizona.
ContributorsWyant, Karl Arthur (Author) / Sabo, John L (Thesis advisor) / Elser, James J (Committee member) / Childers, Daniel L. (Committee member) / Hall, Sharon J (Committee member) / Stromberg, Juliet C. (Committee member) / Arizona State University (Publisher)
Created2014
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Description

Though cities occupy only a small percentage of Earth's terrestrial surface, humans concentrated in urban areas impact ecosystems at local, regional and global scales. I examined the direct and indirect ecological outcomes of human activities on both managed landscapes and protected native ecosystems in and around cities. First, I used

Though cities occupy only a small percentage of Earth's terrestrial surface, humans concentrated in urban areas impact ecosystems at local, regional and global scales. I examined the direct and indirect ecological outcomes of human activities on both managed landscapes and protected native ecosystems in and around cities. First, I used highly managed residential yards, which compose nearly half of the heterogeneous urban land area, as a model system to examine the ecological effects of people's management choices and the social drivers of those decisions. I found that a complex set of individual and institutional social characteristics drives people's decisions, which in turn affect ecological structure and function across scales from yards to cities. This work demonstrates the link between individuals' decision-making and ecosystem service provisioning in highly managed urban ecosystems.

Second, I examined the distribution of urban-generated air pollutants and their complex ecological outcomes in protected native ecosystems. Atmospheric carbon dioxide (CO2), reactive nitrogen (N), and ozone (O3) are elevated near human activities and act as both resources and stressors to primary producers, but little is known about their co-occurring distribution or combined impacts on ecosystems. I investigated the urban "ecological airshed," including the spatial and temporal extent of N deposition, as well as CO2 and O3 concentrations in native preserves in Phoenix, Arizona and the outlying Sonoran Desert. I found elevated concentrations of ecologically relevant pollutants co-occur in both urban and remote native lands at levels that are likely to affect ecosystem structure and function. Finally, I tested the combined effects of CO2, N, and O3 on the dominant native and non-native herbaceous desert species in a multi-factor dose-response greenhouse experiment. Under current and predicted future air quality conditions, the non-native species (Schismus arabicus) had net positive growth despite physiological stress under high O3 concentrations. In contrast, the native species (Pectocarya recurvata) was more sensitive to O3 and, unlike the non-native species, did not benefit from the protective role of CO2. These results highlight the vulnerability of native ecosystems to current and future air pollution over the long term. Together, my research provides empirical evidence for future policies addressing multiple stressors in urban managed and native landscapes.

ContributorsMiessner Cook, Elizabeth (Author) / Hall, Sharon J (Thesis advisor) / Boone, Christopher G (Committee member) / Collins, Scott L. (Committee member) / Grimm, Nancy (Committee member) / Arizona State University (Publisher)
Created2014
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Description
Despite the breadth of studies investigating ecosystem development, an underlying theory guiding this process remains elusive. Several principles have been proposed to explain ecosystem development, though few have garnered broad support in the literature. I used boreal wetland soils as a study system to test a notable goal oriented principle:

Despite the breadth of studies investigating ecosystem development, an underlying theory guiding this process remains elusive. Several principles have been proposed to explain ecosystem development, though few have garnered broad support in the literature. I used boreal wetland soils as a study system to test a notable goal oriented principle: The Maximum Power Principle (MPP). The MPP posits that ecosystems, and in fact all energy systems, develop to maximize power production or the rate of energy production. I conducted theoretical and empirical investigations to test the MPP in northern wetlands.

Permafrost degradation is leading to rapid wetland formation in northern peatland ecosystems, altering the role of these ecosystems in the global carbon cycle. I reviewed the literature on the history of the MPP theory, including tracing its origins to The Second Law of Thermodynamics. To empirically test the MPP, I collected soils along a gradient of ecosystem development and: 1) quantified the rate of adenosine triphosphate (ATP) production--literally cellular energy--to test the MPP; 2) quantified greenhouse gas production (CO2, CH4, and N2O) and microbial genes that produce enzymes catalyzing greenhouse gas production, and; 3) sequenced the 16s rRNA gene from soil microbes to investigate microbial community composition across the chronosequence of wetland development. My results suggested that the MPP and other related theoretical constructs have strong potential to further inform our understanding of ecosystem development. Soil system power (ATP) decreased temporarily as the ecosystem reorganized after disturbance to rates of power production that approached pre-disturbance levels. Rates of CH4 and N2O production were higher at the newly formed bog and microbial genes involved with greenhouse gas production were strongly related to the amount of greenhouse gas produced. DNA sequencing results showed that across the chronosequence of development, the two relatively mature ecosystems--the peatland forest ecosystem prior to permafrost degradation and the oldest bog--were more similar to one another than to the intermediate, less mature bog. Collectively, my results suggest that ecosystem age, rather than ecosystem state, was a more important driver for ecosystem structure and function.
ContributorsChapman, Eric (Author) / Childers, Daniel L. (Thesis advisor) / Cadillo-Quiroz, Hinsby (Committee member) / Hall, Sharon J (Committee member) / Turetsky, Merritt (Committee member) / Arizona State University (Publisher)
Created2015
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As a result of growing populations and uncertain resource availability, urban areas are facing pressure from federal and state agencies, as well as residents, to promote conservation programs that provide services for people and mitigate environmental harm. Current strategies in US cities aim to reduce the impact of municipal and

As a result of growing populations and uncertain resource availability, urban areas are facing pressure from federal and state agencies, as well as residents, to promote conservation programs that provide services for people and mitigate environmental harm. Current strategies in US cities aim to reduce the impact of municipal and household resource use, including programs to promote water conservation. One common conservation program incentivizes the replacement of water-intensive turfgrass lawns with landscapes that use less water consisting of interspersed drought-tolerant shrubs and trees with rock or mulch groundcover (e.g. xeriscapes, rain gardens, water-wise landscapes). A handful of previous studies in experimental landscapes have shown that converting a turfgrass yard to a shrub-dominated landscape has the potential to increase rates of nitrate (NO3-) leaching. However, no studies have examined the drivers or patterns across diverse management practices. In this research, I compared soil nutrient retention and cycling in turfgrass and lawn-alternative xeriscaped yards along a chronosequence of time since land cover change in Tempe, Arizona, in the semi-arid US Southwest. Soil inorganic extractable nitrogen (N) pools were greater in xeriscapes compared to turfgrass lawns. On average xeriscapes contained 2.5±0.4 g NO3--N/m2 in the first 45 cm of soil, compared to 0.6±0.7 g NO3--N/m2 in lawns. Soil NO3--N pools in xeriscaped yards also varied significantly with time: pools were largest 9-13 years after cover change and declined to levels comparable to turfgrass at 18-21 years. Variation in soil extractable NO3--N with landscape age was strongly influenced by management practices that control soil water availability, including shrub cover, the presence of sub-surface plastic sheeting, and the frequency of irrigation. This research is the first to explore the ecological outcomes and temporal dynamics of an increasingly common, ‘sustainable’ land use practice that is universally promoted in US cities. Our findings show that transitioning from turfgrass to water-efficient residential landscaping can lead to an accumulation of NO3--N that may be lost from the soil rooting zone over time, through leaching following irrigation or rainfall. These results have implications for best management practices to optimize the benefits of water-conserving residential yards.
ContributorsHeavenrich, Hannah (Author) / Hall, Sharon J (Thesis advisor) / Larson, Kelli L (Committee member) / Potaki, Diane E (Committee member) / Arizona State University (Publisher)
Created2015
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Description
The Basin and Range province of southwestern USA are composed of different grassland and shrubland ecosystems. Particularly understudied ecosystems in this region are playas, which are ephemerally-flooded wetlands located in topographic low areas of hydrologically-closed dryland catchments. There is not much known about the ecological functioning of playas and the

The Basin and Range province of southwestern USA are composed of different grassland and shrubland ecosystems. Particularly understudied ecosystems in this region are playas, which are ephemerally-flooded wetlands located in topographic low areas of hydrologically-closed dryland catchments. There is not much known about the ecological functioning of playas and the role of playas within desert basins. Even less is known about how global change drivers may affect playas in the future. The main objective of this thesis was to better understand the ecological functioning and the impact of climate change on desert playa wetlands. I collected new data, used existing long-term data, and used simulation modelling techniques to address this objective. I compared playa soils to upland soils and found that playas were hotspots of soil organic carbon and nutrient storage within a desert basin. I also used existing data to analyze the response of above-ground net primary productivity (ANPP) to annual precipitation in playas and upland ecosystems. I found that playa ANPP responded in a non-linear concave-down relationship with annual precipitation amount. Playa ANPP peaked in moderately wet years and declined in very wet years, which was most likely due to flooding; whereas, upland ANPP increased linearly with precipitation. I measured soil organic carbon and nitrogen concentrations in a representative subset of playas and measured the biophysical characteristics of the upland catchments associated with each playa. I found that both catchment geomorphology and vegetation cover were correlated to differences in soil organic carbon and nitrogen among playas. These results showed the importance external soil-inputs delivered via surface runon to playas. Finally, I empirically measured groundwater recharge beneath playas and combined these empirical data with modelling data to forecast how playa groundwater recharge may change in the future. I concluded that playas contribute to groundwater recharge in desert aquifers, playa runon is a strong predictor of playa groundwater recharge, and climate change will have a net-positive impact on groundwater recharge beneath playas. Overall, my thesis research increased the understanding of the role of desert playas on the functioning of dryland ecosystems.
ContributorsMcKenna, Philip (Author) / Sala, Osvaldo E. (Thesis advisor) / Monger, H. Curtis (Committee member) / Hall, Sharon J (Committee member) / Childers, Daniel L. (Committee member) / Arizona State University (Publisher)
Created2016
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The spread of dengue worldwide currently places half of the world’s population at risk. In the absence of a dengue vaccine, control of the disease requires control of the mosquito species that transmit the virus. The most important of these is. Advances in research detailing the responsiveness of Aedes aegypti

The spread of dengue worldwide currently places half of the world’s population at risk. In the absence of a dengue vaccine, control of the disease requires control of the mosquito species that transmit the virus. The most important of these is. Advances in research detailing the responsiveness of Aedes aegypti to small changes in climate enable the production of more sophisticated remote sensing and surveillance techniques for monitoring these populations. Close monitoring of global dengue activity and outbreaks likewise enables a greater specificity when determining to which human populations the virus is most likely to spread. There have been no locally acquired cases in Arizona to date, but the high abundance of Aedes aegypti in the Phoenix Metropolitan area raises concern within the Arizona Department of Health Services over the potential transmission of dengue in the city. This study develops a model that combines mosquito abundance, micro-climatic and demographic information to delineate regions in Phoenix that are most support transmission of dengue. The first chapter focuses on the impact that daytime high and low temperatures have on Aedes aegypti’s ability to become infectious with dengue. It argues that NDVI (normal difference vegetative index) imaging of the Phoenix area can be used to plot areas where mosquitoes are most likely to become competent vectors. The second chapter focuses on the areas in the city where mosquitoes are most likely to be exposed to the virus. Based on proximity to Phoenix and the high volume of traffic across the Arizona-Mexico border, I treat the Mexican state of Sonora as the source of infection. I combine these two analyses, micro-climatic and demographic, to produce maps of Phoenix that show the locations with the highest likelihood of transmission overall.
ContributorsHughes, Tyler (Author) / Perrings, Charles (Thesis advisor) / Kinzig, Ann (Committee member) / Hall, Sharon J (Committee member) / Arizona State University (Publisher)
Created2016
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As an industrial society, humans have increasingly separated agricultural processes from natural ecosystems. Many areas of the Southwestern US, however, maintain traditional practices that link agricultural systems to the natural environment. One such practice, diverting river water into fields via earthen irrigation canals, allows ditch water to recharge

As an industrial society, humans have increasingly separated agricultural processes from natural ecosystems. Many areas of the Southwestern US, however, maintain traditional practices that link agricultural systems to the natural environment. One such practice, diverting river water into fields via earthen irrigation canals, allows ditch water to recharge groundwater and riparian vegetation to prosper along canal banks. As there is growing interest in managing landscapes for multiple ecosystem services, this study was undertaken to determine if irrigation canals function as an extension of the riparian corridor. I was specifically interested in determining if the processes within semi-arid streams that drive riparian plant community structure are manifested in earthen irrigation ditches. I examined herbaceous and woody vegetation along the middle Verde River, AZ, USA and three adjacent irrigation ditches across six months. I also collected sieved hydrochores--seeds dispersing through water--within ditches and the river twelve times. Results indicate that ditch vegetation was similar to streamside river vegetation in abundance (cover and basal area) due to surface water availability but more diverse than river streamside vegetation due to high heterogeneity. Compositionally, herbaceous vegetation along the ditch was most similar to the river banks, while low disturbance fostered woody vegetation along the ditches similar to high floodplain and river terrace vegetation. Hydrochore richness and abundance within the river was dependent on seasonality and stream discharge, but these relationships were dampened in the ditches. Species-specific strategies of hydrochory, however, did emerge in both systems. Strategies include pulse species, which disperse via hydrochory in strict accordance with their restricted dispersal windows, constant species, which are year round hydrochores, and combination species, which show characteristics of both. There was high overlap in the composition of hydrochores in the two systems, with obligate wetland species abundant in both. Upland species were more seasonally constant and abundant in the ditch water than the river. The consistency of river processes and similarity of vegetation suggest that earthen irrigation ditches do function as an extension of the riparian corridor. Thus, these man-made irrigation ditches should be considered by stakeholders for their multiple ecosystem services.
ContributorsBetsch, Jacqueline Michelle (Author) / Stromberg, Juliet C. (Thesis advisor) / Hall, Sharon J (Committee member) / Merritt, David M. (Committee member) / Arizona State University (Publisher)
Created2010
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This thesis explores the independent effects of the manipulation of rocks into alignments, prehistoric farming, and season on soil properties in two areas with a history of prehistoric agriculture in central Arizona, Pueblo la Plata within the Agua Fria National Monument (AFNM), and an archaeological site north of the Phoenix

This thesis explores the independent effects of the manipulation of rocks into alignments, prehistoric farming, and season on soil properties in two areas with a history of prehistoric agriculture in central Arizona, Pueblo la Plata within the Agua Fria National Monument (AFNM), and an archaeological site north of the Phoenix basin along Cave Creek (CC). Soil properties, annual herbaceous biomass and the physical properties of alignments and surface soils were measured and compared across the landscape, specifically on: 1) agricultural rock alignments that were near the archaeological site 2) geologically formed rock alignments that were located 0.5-1 km away from settlements; and 3) areas both near and far from settlements where rock alignments were absent. At AFNM, relatively well-built rock alignments have altered soil properties and processes while less-intact alignments at CC have left few legacies.
ContributorsTrujillo, Jolene Eve (Author) / Hall, Sharon J (Thesis advisor) / Collins, Scott L. (Committee member) / Spielmann, Katherine A. (Committee member) / Arizona State University (Publisher)
Created2011
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With a growing majority of humans living within cities and towns, urbanization is one of the most persistent drivers of change in global land use and challenges to sustainability and biodiversity conservation. The development of cities and towns can substantially shape local and regional environments in which wildlife communities persist.

With a growing majority of humans living within cities and towns, urbanization is one of the most persistent drivers of change in global land use and challenges to sustainability and biodiversity conservation. The development of cities and towns can substantially shape local and regional environments in which wildlife communities persist. Although urbanization can negatively affect wildlife communities – through processes such as habitat fragmentation and non-native species introduction – cities can also provide resources to wildlife, such as through food, water, and space, creating potential opportunities for conservation. However, managing wildlife communities persisting in urbanizing landscapes requires better understanding of how urbanized landscapes influence the ability of wildlife to coexist with one another and with people at local and regional scales. In this dissertation, I addressed these research needs by evaluating the environmental and human factors driving dynamic wildlife community distributions and people’s attitudes towards wildlife. In my first two chapters,I used wildlife camera data collected from across the Phoenix Metropolitan Area, AZ to examine seasonal patterns of wildlife space use, species richness, and interspecific interactions across levels of urbanization with varying landscape characteristics, including plant productivity and spatial land use heterogeneity. Here I found that urbanization was a primary driver of wildlife community characteristics within the region, but that seasonal resource availability and landscape heterogeneity could have mediating influences that require further exploration. In my third chapter, I partnered with wildlife researchers across North America to examine how relationships between urbanization and community composition vary among cities with distinct social-ecological characteristics, finding that effects of local urbanization were more negative in warmer, less vegetated, and more urbanized cities. In my fourth and final chapter, I explored the potential for human-wildlife coexistence by examining how various ideological, environmental, and sociodemographic factors influenced Phoenix area residents’ level of comfort living near different wildlife groups. Although I found that residents’ attitudes were primarily shaped by their relatively static wildlife values, comfort living near wildlife also depended on the characteristics of the neighboring environment, of the residents, and of the wildlife involved, indicating the potential for facilitating conditions for human-wildlife coexistence. Altogether, the findings of this dissertation suggest that the management of wildlife and their interactions with people within cities would benefit from more proactive and holistic consideration of the interacting environmental, wildlife, and human characteristics that influence the persistence of biodiversity within an increasingly urbanized world.
ContributorsHaight, Jeffrey Douglas (Author) / Hall, Sharon J (Thesis advisor) / Lewis, Jesse S (Thesis advisor) / Larson, Kelli L (Committee member) / Wu, Jianguo (Committee member) / Arizona State University (Publisher)
Created2023