Matching Items (31)
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- All Subjects: robotics
- All Subjects: Biomedical Engineering
- Genre: Masters Thesis
- Creators: Marvi, Hamidreza
- Member of: Theses and Dissertations
Description
Single cell phenotypic heterogeneity studies reveal more information about the pathogenesis process than conventional bulk methods. Furthermore, investigation of the individual cellular response mechanism during rapid environmental changes can only be achieved at single cell level. By enabling the study of cellular morphology, a single cell three-dimensional (3D) imaging system can be used to diagnose fatal diseases, such as cancer, at an early stage. One proven method, CellCT, accomplishes 3D imaging by rotating a single cell around a fixed axis. However, some existing cell rotating mechanisms require either intricate microfabrication, and some fail to provide a suitable environment for living cells. This thesis develops a microvorterx chamber that allows living cells to be rotated by hydrodynamic alone while facilitating imaging access. In this thesis work, 1) the new chamber design was developed through numerical simulation. Simulations revealed that in order to form a microvortex in the side chamber, the ratio of the chamber opening to the channel width must be smaller than one. After comparing different chamber designs, the trapezoidal side chamber was selected because it demonstrated controllable circulation and met the imaging requirements. Microvortex properties were not sensitive to the chambers with interface angles ranging from 0.32 to 0.64. A similar trend was observed when chamber heights were larger than chamber opening. 2) Micro-particle image velocimetry was used to characterize microvortices and validate simulation results. Agreement between experimentation and simulation confirmed that numerical simulation was an effective method for chamber design. 3) Finally, cell rotation experiments were performed in the trapezoidal side chamber. The experimental results demonstrated cell rotational rates ranging from 12 to 29 rpm for regular cells. With a volumetric flow rate of 0.5 µL/s, an irregular cell rotated at a mean rate of 97 ± 3 rpm. Rotational rates can be changed by altering inlet flow rates.
ContributorsZhang, Wenjie (Author) / Frakes, David (Thesis advisor) / Meldrum, Deirdre (Thesis advisor) / Chao, Shih-hui (Committee member) / Wang, Xiao (Committee member) / Arizona State University (Publisher)
Created2011
Description
Advancements in mobile technologies have significantly enhanced the capabilities of mobile devices to serve as powerful platforms for sensing, processing, and visualization. Surges in the sensing technology and the abundance of data have enabled the use of these portable devices for real-time data analysis and decision-making in digital signal processing (DSP) applications. Most of the current efforts in DSP education focus on building tools to facilitate understanding of the mathematical principles. However, there is a disconnect between real-world data processing problems and the material presented in a DSP course. Sophisticated mobile interfaces and apps can potentially play a crucial role in providing a hands-on-experience with modern DSP applications to students. In this work, a new paradigm of DSP learning is explored by building an interactive easy-to-use health monitoring application for use in DSP courses. This is motivated by the increasing commercial interest in employing mobile phones for real-time health monitoring tasks. The idea is to exploit the computational abilities of the Android platform to build m-Health modules with sensor interfaces. In particular, appropriate sensing modalities have been identified, and a suite of software functionalities have been developed. Within the existing framework of the AJDSP app, a graphical programming environment, interfaces to on-board and external sensor hardware have also been developed to acquire and process physiological data. The set of sensor signals that can be monitored include electrocardiogram (ECG), photoplethysmogram (PPG), accelerometer signal, and galvanic skin response (GSR). The proposed m-Health modules can be used to estimate parameters such as heart rate, oxygen saturation, step count, and heart rate variability. A set of laboratory exercises have been designed to demonstrate the use of these modules in DSP courses. The app was evaluated through several workshops involving graduate and undergraduate students in signal processing majors at Arizona State University. The usefulness of the software modules in enhancing student understanding of signals, sensors and DSP systems were analyzed. Student opinions about the app and the proposed m-health modules evidenced the merits of integrating tools for mobile sensing and processing in a DSP curriculum, and familiarizing students with challenges in modern data-driven applications.
ContributorsRajan, Deepta (Author) / Spanias, Andreas (Thesis advisor) / Frakes, David (Committee member) / Turaga, Pavan (Committee member) / Arizona State University (Publisher)
Created2013
Description
Magnetic Resonance Imaging using spiral trajectories has many advantages in speed, efficiency in data-acquistion and robustness to motion and flow related artifacts. The increase in sampling speed, however, requires high performance of the gradient system. Hardware inaccuracies from system delays and eddy currents can cause spatial and temporal distortions in the encoding gradient waveforms. This causes sampling discrepancies between the actual and the ideal k-space trajectory. Reconstruction assuming an ideal trajectory can result in shading and blurring artifacts in spiral images. Current methods to estimate such hardware errors require many modifications to the pulse sequence, phantom measurements or specialized hardware. This work presents a new method to estimate time-varying system delays for spiral-based trajectories. It requires a minor modification of a conventional stack-of-spirals sequence and analyzes data collected on three orthogonal cylinders. The method is fast, robust to off-resonance effects, requires no phantom measurements or specialized hardware and estimate variable system delays for the three gradient channels over the data-sampling period. The initial results are presented for acquired phantom and in-vivo data, which show a substantial reduction in the artifacts and improvement in the image quality.
ContributorsBhavsar, Payal (Author) / Pipe, James G (Thesis advisor) / Frakes, David (Committee member) / Kodibagkar, Vikram (Committee member) / Arizona State University (Publisher)
Created2013
Description
A cerebral aneurysm is a bulging of a blood vessel in the brain. Aneurysmal rupture affects 25,000 people each year and is associated with a 45% mortality rate. Therefore, it is critically important to treat cerebral aneurysms effectively before they rupture. Endovascular coiling is the most effective treatment for cerebral aneurysms. During coiling process, series of metallic coils are deployed into the aneurysmal sack with the intent of reaching a sufficient packing density (PD). Coils packing can facilitate thrombus formation and help seal off the aneurysm from circulation over time. While coiling is effective, high rates of treatment failure have been associated with basilar tip aneurysms (BTAs). Treatment failure may be related to geometrical features of the aneurysm. The purpose of this study was to investigate the influence of dome size, parent vessel (PV) angle, and PD on post-treatment aneurysmal hemodynamics using both computational fluid dynamics (CFD) and particle image velocimetry (PIV). Flows in four idealized BTA models with a combination of dome sizes and two different PV angles were simulated using CFD and then validated against PIV data. Percent reductions in post-treatment aneurysmal velocity and cross-neck (CN) flow as well as percent coverage of low wall shear stress (WSS) area were analyzed. In all models, aneurysmal velocity and CN flow decreased after coiling, while low WSS area increased. However, with increasing PD, further reductions were observed in aneurysmal velocity and CN flow, but minimal changes were observed in low WSS area. Overall, coil PD had the greatest impact while dome size has greater impact than PV angle on aneurysmal hemodynamics. These findings lead to a conclusion that combinations of treatment goals and geometric factor may play key roles in coil embolization treatment outcomes, and support that different treatment timing may be a critical factor in treatment optimization.
ContributorsIndahlastari, Aprinda (Author) / Frakes, David (Thesis advisor) / Chong, Brian (Committee member) / Muthuswamy, Jitendran (Committee member) / Arizona State University (Publisher)
Created2013
Description
Human operators have difficulty driving cranes quickly, accurately, and safely because of the slow response of heavy crane structures, non-intuitive control interfaces, and payload oscillations. Recently, a novel hand-motion crane control system has been proposed to improve performance by coupling an intuitive control interface with an element that reduces the complex oscillatory behavior of the payload. Hand-motion control allows operators to drive a crane by simply moving a hand-held radio-frequency tag through the desired path. Real-time location sensors are used to track the movements of the tag and the tag position is used in a feedback control loop to drive the crane. An input shaper is added to eliminate dangerous payload oscillations. However, tag position measurements are corrupted by noise. It is important to understand the noise properties so that appropriate filters can be designed to mitigate the effects of noise and improve tracking accuracy. This work discusses implementing filtering techniques to address the issue of noise in the operating environment. Five different filters are used on experimentally-acquired tag trajectories to reduce noise. The filtered trajectories are then used to drive crane simulations. Filter performance is evaluated with respect to the energy usage of the crane trolley, the settling time of the crane payload oscillations, and the safety corridor of the crane trajectory. The effects of filter window lengths on these parameters are also investigated. An adaptive filtering technique, namely the Kalman filter, adapts to the noise characteristics of the workspace to minimize the tag tracking error and performs better than the other filtering techniques examined.
ContributorsRagunathan, Sudarshan (Author) / Frakes, David (Thesis advisor) / Singhose, William (Committee member) / Tillery, Stephen Helms (Committee member) / Arizona State University (Publisher)
Created2012
Description
Single cell analysis has become increasingly important in understanding disease onset, progression, treatment and prognosis, especially when applied to cancer where cellular responses are highly heterogeneous. Through the advent of single cell computerized tomography (Cell-CT), researchers and clinicians now have the ability to obtain high resolution three-dimensional (3D) reconstructions of single cells. Yet to date, no live-cell compatible version of the technology exists. In this thesis, a microfluidic chip with the ability to rotate live single cells in hydrodynamic microvortices about an axis parallel to the optical focal plane has been demonstrated. The chip utilizes a novel 3D microchamber design arranged beneath a main channel creating flow detachment into the chamber, producing recirculating flow conditions. Single cells are flowed through the main channel, held in the center of the microvortex by an optical trap, and rotated by the forces induced by the recirculating fluid flow. Computational fluid dynamics (CFD) was employed to optimize the geometry of the microchamber. Two methods for the fabrication of the 3D microchamber were devised: anisotropic etching of silicon and backside diffuser photolithography (BDPL). First, the optimization of the silicon etching conditions was demonstrated through design of experiment (DOE). In addition, a non-conventional method of soft-lithography was demonstrated which incorporates the use of two positive molds, one of the main channel and the other of the microchambers, compressed together during replication to produce a single ultra-thin (<200 µm) negative used for device assembly. Second, methods for using thick negative photoresists such as SU-8 with BDPL have been developed which include a new simple and effective method for promoting the adhesion of SU-8 to glass. An assembly method that bonds two individual ultra-thin (<100 µm) replications of the channel and the microfeatures has also been demonstrated. Finally, a pressure driven pumping system with nanoliter per minute flow rate regulation, sub-second response times, and < 3% flow variability has been designed and characterized. The fabrication and assembly of this device is inexpensive and utilizes simple variants of conventional microfluidic fabrication techniques, making it easily accessible to the single cell analysis community.
ContributorsMyers, Jakrey R (Author) / Meldrum, Deirdre (Thesis advisor) / Johnson, Roger (Committee member) / Frakes, David (Committee member) / Arizona State University (Publisher)
Created2012
Description
Admittance control with fixed damping has been a successful control strategy in previous human-robotic interaction research. This research implements a variable damping admittance controller in a 7-DOF robotic arm coupled with a human subject’s arm at the end effector to study the trade-off of agility and stability and aims to produce a control scheme which displays both fast rise time and stability. The variable damping controller uses a measure of intent of movement to vary damping to aid the user’s movement to a target. The range of damping values is bounded by incorporating knowledge of a human arm to ensure the stability of the coupled human-robot system. Human subjects completed experiments with fixed positive, fixed negative, and variable damping controllers to evaluate the variable damping controller’s ability to increase agility and stability. Comparisons of the two fixed damping controllers showed as fixed damping increased, the coupled human-robot system reacted with less overshoot at the expense of rise time, which is used as a measure of agility. The inverse was also true; as damping became increasingly negative, the overshoot and stability of the system was compromised, while the rise time became faster. Analysis of the variable damping controller demonstrated humans could extract the benefits of the variable damping controller in its ability to increase agility in comparison to a positive damping controller and increase stability in comparison to a negative damping controller.
ContributorsBitz, Tanner Jacob (Author) / Lee, Hyunglae (Thesis advisor) / Marvi, Hamidreza (Committee member) / Yong, Sze Zheng (Committee member) / Arizona State University (Publisher)
Created2019
Description
Tubes and pipelines serve as a major component of several units in power plants and oil, gas, and water transmission. These structures undergo extreme conditions, where temperature and pressure vary, leading to corroding of the pipe over time, creating defects in them. A small crack in these tubes can cause major safety problems, so a regular inspection of these tubes is required. Most power plants prefer to use non-destructive testing procedures, such as long-range ultrasonic testing and phased array ultrasonic testing, to name a few. These procedures can be carried out with the help of crawlers that go inside the pipes. One of the main drawbacks of the current robotic tube inspection robots is the lack of maneuverability over complex tubular structures and the inability to traverse non-ferromagnetic pipelines. The main motivation of this project is to create a robotic system that can grab onto ferromagnetic and non-ferromagnetic tubes and move along those, move onto adjacent tubes, and maneuver around flanges and bends in the tube. Furthermore, most of the robots used for inspection rely on roller balls and suction-based components that can allow the robot to hold on to the curved surface of the tube. These techniques fail when the surface is rough or uneven, which has served as an inspiration to look at friction-based solutions. Lizards are known for their agile locomotion, as well as their ability to grab on any surface irrespective of the surface texture. The work presented here is focused on the design and control of a lizard-inspired tube inspection robot that can be used to inspect complex tubular structures made of any material.
ContributorsMasurkar, Nihar Dattaram (Author) / Marvi, Hamidreza (Thesis advisor) / Dehghan-Niri, Ehsan (Committee member) / Lee, Hyunglae (Committee member) / Arizona State University (Publisher)
Created2022
Description
The ability for aerial manipulators to stay aloft while interacting with dynamic environments is critical for successfully in situ data acquisition methods in arboreal environments. One widely used platform utilizes a six degree of freedom manipulator attached to quadcoper or octocopter, to sample a tree leaf by maintaining the system in a hover while the arm pulls the leaf for a sample. Other system are comprised of simpler quadcopter with a fixed mechanical device to physically cut the leaf while the system is manually piloted. Neither of these common methods account or compensate for the variation of inherent dynamics occurring in the arboreal-aerial manipulator interaction effects. This research proposes force and velocity feedback methods to control an aerial manipulation platform while allowing waypoint navigation within the work space to take place. Using these methods requires minimal knowledge of the system and the dynamic parameters. This thesis outlines the Robot Operating System (ROS) based Open Autonomous Air Vehicle (OpenUAV) simulations performed on the purposed three degree of freedom redundant aerial manipulation platform.
ContributorsCohen, Daniel (Author) / Das, Jnaneshwar (Thesis advisor) / Marvi, Hamidreza (Committee member) / Saldaña, David (Committee member) / Arizona State University (Publisher)
Created2022
Description
Animals have always been a source of inspiration for real-life problems. The octopus is one such animal that has a lot of untapped potential. The octopus’s arm is without solid joints or bone structure and despite this it can achieve many complicated movements with virtually infinite degrees of freedom. This ability is made possible through the unique morphology of the arm. The octopus’s arm is divided into transverse, longitudinal, oblique, and circular muscle groups and each one has a unique muscle fiber orientation. The octopus’s arm is classified as a hydrostat because it maintains a constant volume while contracting with the help of its different muscle groups. These muscle groups allow elongation, shortening, bending, and twisting of the arm when they work in combination with each other. To confirm the role of transverse and longitudinal muscle groups, an electromyography (EMG) recording of these muscle groups was performed while an amputated arm of an Octopus bimaculoides was stimulated with an electrical signal to induce movement. Statistical analysis was performed on these results to confirm the roles of each muscle group quantitatively. Octopus arm morphology was previously assumed to be uniform along the arm. Through a magnetic resonance imaging (MRI) study at the proximal, middle, and distal sections of the arm this notion was disproven, and a new pattern was discovered. Drawing inspiration from this finding and previous octopus arm prototypes, 4 bio-inspired designs were conceived and tested in finite element analysis (FEA) simulations. Four tests in elongation, shortening, bending, and transverse-assisted bending movements were performed on all designs to compare each design’s performance. The findings in this study have applications in engineering and soft robotics fields for use cases such as, handling fragile objects, minimally invasive surgeries, difficult-to-access areas that require squeezing through small holes, and other novel cases.
ContributorsAhmadi, Salaheddin (Author) / Marvi, Hamidreza (Thesis advisor) / Fisher, Rebecca (Committee member) / Xu, Zhe (Committee member) / Arizona State University (Publisher)
Created2023