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We designed and constructed a cryostat setup for MKID detectors. The goal for the cryostat is to have four stages: 40K, 4K, 1K and 250mK. Prior to the start of my thesis, the cryostat was reaching 70K and 9K on the first and second stages respectively. During the first semester

We designed and constructed a cryostat setup for MKID detectors. The goal for the cryostat is to have four stages: 40K, 4K, 1K and 250mK. Prior to the start of my thesis, the cryostat was reaching 70K and 9K on the first and second stages respectively. During the first semester of my thesis I worked on getting the second stage to reach below 4K such that it would be cold enough to add a sorption fridge to reach 250mK. Various parts were machined for the cryostat and some tweaks were made to existing pieces. The largest changes were we thinned our stainless steel supports from 2mm to 10mil and we added roughly 6-10 layers of multi-layer insulation to the first and second stages. Our result was that we now reach temperatures of 36K and 2.6K on the first and second stages respectively. Next we added the sorption fridge to the 4K stage by having the 4K stage remachined to allow the sorption fridge to be mounted to the stage. Then I designed a final, two stage, setup for the 1K and 250mK stages that has maximum capabilities of housing a six inch wafer for testing. The design was sent to a machinist, but the parts were unfinished by the end of my thesis, so the parts and stage were not tested. Once the cryostat was fully tested and proven to reach the necessary temperatures, preliminary testing was done on a Microwave Kinetic Inductance Detector (MKID) provided by Stanford. Data was collected on the resonance and quality factor as they shifted with final stage temperature (5K to 285mK) and with input power (60dB to 15dB). The data was analyzed and the results agreed within expectations, as the resonant frequency and quality factor shifted down with increased temperature on the MKID. Finally, a noise characterization setup was designed to test the noise of devices, but was not fully implemented.
ContributorsAbers, Paul (Author) / Mauskopf, Phil (Thesis director) / Groppi, Chris (Committee member) / Department of Physics (Contributor) / School of Earth and Space Exploration (Contributor) / Barrett, The Honors College (Contributor)
Created2017-05
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Description

Lyme disease is a common tick-borne illness caused by the Gram-negative bacterium Borrelia burgdorferi. An outer membrane protein of Borrelia burgdorferi, P66, has been suggested as a possible target for Lyme disease treatments. However, a lack of structural information available for P66 has hindered attempts to design medications to target

Lyme disease is a common tick-borne illness caused by the Gram-negative bacterium Borrelia burgdorferi. An outer membrane protein of Borrelia burgdorferi, P66, has been suggested as a possible target for Lyme disease treatments. However, a lack of structural information available for P66 has hindered attempts to design medications to target the protein. Therefore, this study attempted to find methods for expressing and purifying P66 in quantities that can be used for structural studies. It was found that by using the PelB signal sequence, His-tagged P66 could be directed to the outer membrane of Escherichia coli, as confirmed by an anti-His Western blot. Further attempts to optimize P66 expression in the outer membrane were made, pending verification via Western blotting. The ability to direct P66 to the outer membrane using the PelB signal sequence is a promising first step in determining the overall structure of P66, but further work is needed before P66 is ready for large-scale purification for structural studies.

ContributorsRamirez, Christopher Nicholas (Author) / Fromme, Petra (Thesis director) / Hansen, Debra (Committee member) / Department of Physics (Contributor) / School of Molecular Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2021-05
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Description
Although extracellular throughout their lifecycle, trypanosomes are able to persist despite strong host immune responses through a process known as antigenic variation involving a large, highly diverse family of surface glycopro- tein (VSG) genes, only one of which is expressed at a time. Previous studies have used mathematical models to

Although extracellular throughout their lifecycle, trypanosomes are able to persist despite strong host immune responses through a process known as antigenic variation involving a large, highly diverse family of surface glycopro- tein (VSG) genes, only one of which is expressed at a time. Previous studies have used mathematical models to investigate the relationship between VSG switching and the dynamics of trypanosome infections, but none have explored the role of multiple VSG expression sites or the contribution of mosaic gene conversion events involving VSG pseudogenes.
ContributorsKoury, Michael Andrew (Author) / Taylor, Jesse (Thesis director) / Gumel, Abba (Committee member) / Department of Physics (Contributor) / School of Mathematical and Statistical Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2020-05
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Description
This research evaluates the capabilities of typical radiological measures and dual-energy systems to differentiate common kidney stones materials: uric acid, oxalates, phosphates, struvite, and cystine. Two different X-ray spectra (80 kV and 120 kV) were applied and the dual-energy ratio of individual kidney stones was used to figure out the

This research evaluates the capabilities of typical radiological measures and dual-energy systems to differentiate common kidney stones materials: uric acid, oxalates, phosphates, struvite, and cystine. Two different X-ray spectra (80 kV and 120 kV) were applied and the dual-energy ratio of individual kidney stones was used to figure out the discriminability of different materials. A CT cross-section with a prospective kidney stone was analyzed to see the capabilities of such a technique. Typical radiological measures suggested that phosphates and oxalate stones can be distinguished from uric acid stones while dual-energy seemed to prove similar effectiveness.
ContributorsDelafuente, Nicholas William (Author) / Rez, Peter (Thesis director) / Alarcon, Ricardo (Committee member) / Department of Physics (Contributor) / Economics Program in CLAS (Contributor) / Barrett, The Honors College (Contributor)
Created2020-05
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Description
The Compact X-ray Light Source is an x-ray source at ASU that allows scientists to study the structures and dynamics of matter on an atomic scale. The radio frequency system that provides the power to accelerate electrons in the Compact X-ray Light Source must operate with a high degree of

The Compact X-ray Light Source is an x-ray source at ASU that allows scientists to study the structures and dynamics of matter on an atomic scale. The radio frequency system that provides the power to accelerate electrons in the Compact X-ray Light Source must operate with a high degree of precision. This thesis measures the precision with which that system performs.
ContributorsBabic, Gregory (Author) / Graves, William (Thesis director) / Kitchen, Jennifer (Committee member) / Holl, Mark (Committee member) / Barrett, The Honors College (Contributor) / Electrical Engineering Program (Contributor) / Department of Physics (Contributor)
Created2022-05