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- All Subjects: wastewater
- Creators: Rittmann, Bruce
- Status: Published
Anaerobic Digestion (AD) typically stabilizes 40-60% of influent wastewater sludge. Improving the methane yield in wastewater may produce enough energy to power some wastewater treatment processes, while the production of volatile-fatty acids (VFAs) generates economic incentives for yard waste pre-fermentation. In this research, pre-fermenters consisting of inocula composed of media; cellulose, lantana, or grass; and rabbit cecotrope were fed various concentrations of plant matter. The contents of these pre-fermenters were the influent for respective anaerobic digesters. The microbial consortium derived for the lignocellulosic pretreatment with common yard waste in Arizona successfully increased methane production in AD, while producing additional VFAs during pretreatment in all systems. The performance of the system appeared to depend on plant matter loading and operating time, with a higher plant loading increasing the VFA production and a longer operating time increasing soluble chemical oxygen demand (COD) in pre-fermentation, and therefore the methane production in AD increased. The pre-fermenter with the highest plant matter loading and longest operating time –1.44 g plant matter per day at a 9.6% influent concentration and 193 days of total operating time– produced 10,000 mg COD/L of VFA, and its reactor produced about 460 mL methane (CH4) per day, which was almost twice the production of the control AD at 250 mL CH4 per day. This research uses yard waste that would previously be disposed of in landfill to increase valuable product production in AD. The potential value added to wastewater treatment plant (WWTP) processes by these methods could incentivize the expansion of wastewater treatment, thereby increasing sanitation access. The use of net-neutral biogas as a fuel source for WWTPs is additionally an incremental solution for reducing carbon equivalents present in the atmosphere, thereby reducing the greenhouse gas effect.
Agassiz’s desert tortoise (Gopherus agassizii) is a long-lived species native to the Mojave Desert and is listed as threatened under the US Endangered Species Act. To aid conservation efforts for preserving the genetic diversity of this species, we generated a whole genome reference sequence with an annotation based on deep transcriptome sequences of adult skeletal muscle, lung, brain, and blood. The draft genome assembly for G. agassizii has a scaffold N50 length of 252 kbp and a total length of 2.4 Gbp. Genome annotation reveals 20,172 protein-coding genes in the G. agassizii assembly, and that gene structure is more similar to chicken than other turtles. We provide a series of comparative analyses demonstrating (1) that turtles are among the slowest-evolving genome-enabled reptiles, (2) amino acid changes in genes controlling desert tortoise traits such as shell development, longevity and osmoregulation, and (3) fixed variants across the Gopherus species complex in genes related to desert adaptations, including circadian rhythm and innate immune response. This G. agassizii genome reference and annotation is the first such resource for any tortoise, and will serve as a foundation for future analysis of the genetic basis of adaptations to the desert environment, allow for investigation into genomic factors affecting tortoise health, disease and longevity, and serve as a valuable resource for additional studies in this species complex.
Data Availability: All genomic and transcriptomic sequence files are available from the NIH-NCBI BioProject database (accession numbers PRJNA352725, PRJNA352726, and PRJNA281763). All genome assembly, transcriptome assembly, predicted protein, transcript, genome annotation, repeatmasker, phylogenetic trees, .vcf and GO enrichment files are available on Harvard Dataverse (doi:10.7910/DVN/EH2S9K).