Embryo Project Encyclopedia

Mechanism of Notch Signaling: The image depicts a type of cell signaling, in which two animal cells interact and transmit a molecular signal from one to the other. The process results in the production of proteins, which influence the cells as they differentiate, move, and contribute to embryological development. In the membrane of the signaling cell, there is a ligand (represented by a green oval). The ligand functions to activate a change in a receptor molecule. In the receiving cell, there are receptors; in this case, Notch proteins (represented by orange forks). The Notch proteins are embedded in the receiving cell membrane, and they have at least two parts: an intracellular domain (inside the cell) and the receptor (outside the cell). Once the ligand and receptor bind to each other, a protease (represented by the dark red triangle) can sever the intracellular domain from the rest of the Notch receptor. Inside the nucleus of the receiving cell (represented by the gray area) are the cellês DNA (represented by the multi-colored helices) and its transcription factors (blue rectangles). Transcription factors are proteins that bind to DNA to regulate transcription, the first step in gene expression, which eventually yields proteins or other products. Initially, repressor proteins (represented by a red irregular hexagon) prevent transcription factors from allowing transcription. When the severed Notch receptor intracellular domain reaches the nucleus, it displaces the repressor. The transcription factor can then signal for transcription to occur. 1) There is a Notch receptor protein in the membrane of a receiving cell, and a ligand for this receptor (for example, Delta) in the membrane of the signaling cell. When the ligand binds to the receptor, the intracellular domain of the receptor changes shape. 2) Inside the receiving cell, there are proteases. Once the intracellular domain of the receptor changes shape, the protease can bind to it and shear the intracellular domain away from the rest of the receptor molecule. 3) The severed intracellular domain is shuttled to the receiving cell nucleus. Here, the intracellular domain displaces a repressor protein. This allows a transcription factor to initiate DNA transcription. During transcription, DNA is used as a template to create RNA. Following transcription, the process of translation occurs, which uses RNA as a template to create proteins. These proteins influence the behavior, fate, and differentiation of cells, which contribute to normal embryonic development

Acid dissolution is a technique of removing a fossil from the surrounding rock matrix in which it is encased by dissolving that matrix with acid. Fossilized bone, though strong enough to be preserved for thousands or millions of years, is often more delicate than rock. Once a fossil is discovered, scientists must remove the fossil from its surroundings without damaging the fossil itself. Scientists have used chemicals to expose vertebrate fossils since the 1930s, and in the late 1990s Terry Manning, an amateur scientist and technician working in England, adapted the technology to dinosaur eggs. Manning used acid dissolution on dinosaur eggs to expose the embryos beneath the rock and fossil shell. Manning's acid dissolution enabled scientists to better study the remains of dinosaur embryos otherwise hidden beneath layers of eggshell and rock, revealing previously unrecorded aspects of dinosaur growth and development.

Boris Ephrussi and George Wells Beadle developed a transplantation technique on flies, Drosophila melanogaster, which they described in their 1936 article A Technique of Transplantation for Drosophila. The technique of injecting a tissue from one fly larva into another fly larva, using a micropipette, to grow that tissue in the second larvae, was a means for investigating development of Drosophila. Through this technique, Beadle and Ephrussi studied the role of genes in embryological processes. Beadle and Ephrussi were the first to apply the transplantation method, which had previously been used in the study of larger insects, to the smaller sized Drosophila. Beadle and Ephrussi used this method of transplantation to determine if parts of the optic disc, the section of a larvae that later become the eye buds in the adult, could be extracted from one larva and transplanted into another. They later built upon this research to relate the production of molecules in cells to gene function.

'On the Permanent Life of Tissues outside of the Organism' reports Alexis Carrel's 1912 experiments on the maintenance of tissue in culture media. At the time, Carrel was a French surgeon and biologist working at the Rockefeller Institute in New York City. In his paper, Carrel reported that he had successfully maintained tissue cultures, which derived from connective tissues of developing chicks and other tissue sources, by serially culturing them. Among all the tissue cultures Carrel reported, one was maintained for more than two months, whereas previous efforts had only been able to keep tissues in vitro for three to fifteen days. Carrel’s experiments contributed to the development of long-term tissue culture techniques, which were useful in the study of embryology and eventually became instrumental in stem cell research. Despite later evidence to the contrary, Carrel believed that as long as the tissue culture method was accurately applied, tissues kept outside of the organisms should be able to divide indefinitely and have permanent life.

When scientists discovered a 3.3
million-year-old skeleton of a child of the human lineage (hominin) in
2000, in the village of Hadar, Ethiopia, they were able to study growth
and development of Australopithecus
afarensis, an extinct hominin species. The team of researchers,
led by Zeresenay Alemseged of the Max Planck Institute for Evolutionary
Anthropology in Leipzig, Germany, named the fossil DIK 1-1 and nicknamed
it Dikika baby after the Dikika research site. The Dikika fossil
preserves much of the skull, including the jaw and teeth, which enabled
scientists to study the teeth microstructures and to reconstruct the
pace at which individuals of the hominin A. afarensis
developed.

The Edinburgh Mouse Atlas, also called the e-Mouse Atlas Project (EMAP), is an online resource comprised of the e-Mouse Atlas (EMA), a detailed digital model of mouse development, and the e-Mouse Atlas of Gene Expression (EMAGE), a database that identifies sites of gene expression in mouse embryos. Duncan Davidson and Richard Baldock founded the project in 1992, and the Medical Research Council (MRC) in Edinburgh, United Kingdom, funds the project. Davidson and Baldock announced the project in an article titled A Real Mouse for Your Computer, citing the need to manage and analyze the volume of data that overwhelmed developmental biologists. Though EMAP resources were distributed via CD-ROM in the early years, the project moved increasingly online by the early 2000s, and into the early decades of the twenty-first century, was in active development. EMAP can be utilized as a developmental biology teaching resource and as a research tool that enables scientists to explore annotated 3D virtual mouse embryos. EMAP's goal is to illuminate the molecular basis of tissue differentiation.

James William Kitching collected and studied fossils of dinosaurs and early humans in the twentieth century. He worked at the Bernard Price Institute for Paleontological Research in South Africa. During the fifty-three years he worked at the institute, Kitching spent eighteen of those in the field uncovering fossils. Kitching recovered fossils of early human ancestors, later called Australopithecines, as well as fossils of dinosaurs and ancient mammals. When he died in 2003, the Bernard Price Institute housed one of the largest fossil collections in the southern hemisphere. Kitching and his team had collected most of those fossils. Additionally, he helped discover Massospondylus embryos, the first dinosaur embryos ever recovered, which enabled scientists to examine dinosaurs before birth.

Dinosaur egg parataxonomy is a classification system that organizes dinosaur eggs by descriptive features such as shape, size, and shell thickness. Though egg parataxonomy originated in the nineteenth century, Zi-Kui Zhao from Beijing, China, developed a modern parataxonomic system in the late twentieth century. Zhao's system, published in 1975, enabled scientists to organize egg specimens according to observable features, and to communicate their findings. The eggshell protects the developing embryo, enables gas exchange between the embryo and the environment external to the egg, and the internal components of the egg provide nutrients for the embryo. Those external and internal features that support a developing embryo leave their mark on eggshells. Dinosaur egg parataxonomy classifies those characteristics and provides insight into dinosaur egg-laying behaviors, reproductive physiology, and embryonic development.

Christiane Nusslein-Volhard studied how genes control embryonic development in flies and in fish in Europe during the twentieth and twenty-first centuries. In the 1970s, Nusslein-Volhard focused her career on studying the genetic control of development in the fruit fly Drosophila melanogaster. In 1988, Nusslein-Volhard identified the first described morphogen, a protein coded by the gene bicoid in flies. In 1995, along with Eric F. Wieschaus and Edward B. Lewis, she received the Nobel Prize in Physiology or Medicine for the discovery of genes that establish the body plan and segmentation in Drosophila. Nusslein-Volhard also investigated the genetic control of embryonic development to zebrafish, further generalizing her findings and helping establishing zebrafish as a model organism for studies of vertebrate development.

George Wells Beadle and Edward Lawrie Tatum's 1941 article Genetic Control of Biochemical Reactions in Neurospora detailed their experiments on how genes regulated chemical reactions, and how the chemical reactions in turn affected development in the organism. Beadle and Tatum experimented on Neurospora, a type of bread mold, and they concluded that mutations to genes affected the enzymes of organisms, a result that biologists later generalized to proteins, not just enzymes. Beadle and Tatum's experiments provided an early link between genetics and the field of molecular biology.