This collection includes both ASU Theses and Dissertations, submitted by graduate students, and the Barrett, Honors College theses submitted by undergraduate students. 

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Description
Continuous monitoring in the adequate temporal and spatial scale is necessary for a better understanding of environmental variations. But field deployments of molecular biological analysis platforms in that scale are currently hindered because of issues with power, throughput and automation. Currently, such analysis is performed by the collection of large

Continuous monitoring in the adequate temporal and spatial scale is necessary for a better understanding of environmental variations. But field deployments of molecular biological analysis platforms in that scale are currently hindered because of issues with power, throughput and automation. Currently, such analysis is performed by the collection of large sample volumes from over a wide area and transporting them to laboratory testing facilities, which fail to provide any real-time information. This dissertation evaluates the systems currently utilized for in-situ field analyses and the issues hampering the successful deployment of such bioanalytial instruments for environmental applications. The design and development of high throughput, low power, and autonomous Polymerase Chain Reaction (PCR) instruments, amenable for portable field operations capable of providing quantitative results is presented here as part of this dissertation. A number of novel innovations have been reported here as part of this work in microfluidic design, PCR thermocycler design, optical design and systems integration. Emulsion microfluidics in conjunction with fluorinated oils and Teflon tubing have been used for the fluidic module that reduces cross-contamination eliminating the need for disposable components or constant cleaning. A cylindrical heater has been designed with the tubing wrapped around fixed temperature zones enabling continuous operation. Fluorescence excitation and detection have been achieved by using a light emitting diode (LED) as the excitation source and a photomultiplier tube (PMT) as the detector. Real-time quantitative PCR results were obtained by using multi-channel fluorescence excitation and detection using LED, optical fibers and a 64-channel multi-anode PMT for measuring continuous real-time fluorescence. The instrument was evaluated by comparing the results obtained with those obtained from a commercial instrument and found to be comparable. To further improve the design and enhance its field portability, this dissertation also presents a framework for the instrumentation necessary for a portable digital PCR platform to achieve higher throughputs with lower power. Both systems were designed such that it can easily couple with any upstream platform capable of providing nucleic acid for analysis using standard fluidic connections. Consequently, these instruments can be used not only in environmental applications, but portable diagnostics applications as well.
ContributorsRay, Tathagata (Author) / Youngbull, Cody (Thesis advisor) / Goryll, Michael (Thesis advisor) / Blain Christen, Jennifer (Committee member) / Yu, Hongyu (Committee member) / Arizona State University (Publisher)
Created2013
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Description
Over the past fifty years, the development of sensors for biological applications has increased dramatically. This rapid growth can be attributed in part to the reduction in feature size, which the electronics industry has pioneered over the same period. The decrease in feature size has led to the production of

Over the past fifty years, the development of sensors for biological applications has increased dramatically. This rapid growth can be attributed in part to the reduction in feature size, which the electronics industry has pioneered over the same period. The decrease in feature size has led to the production of microscale sensors that are used for sensing applications, ranging from whole-body monitoring down to molecular sensing. Unfortunately, sensors are often developed without regard to how they will be integrated into biological systems. The complexities of integration are underappreciated. Integration involves more than simply making electrical connections. Interfacing microscale sensors with biological environments requires numerous considerations with respect to the creation of compatible packaging, the management of biological reagents, and the act of combining technologies with different dimensions and material properties. Recent advances in microfluidics, especially the proliferation of soft lithography manufacturing methods, have established the groundwork for creating systems that may solve many of the problems inherent to sensor-fluidic interaction. The adaptation of microelectronics manufacturing methods, such as Complementary Metal-Oxide-Semiconductor (CMOS) and Microelectromechanical Systems (MEMS) processes, allows the creation of a complete biological sensing system with integrated sensors and readout circuits. Combining these technologies is an obstacle to forming complete sensor systems. This dissertation presents new approaches for the design, fabrication, and integration of microscale sensors and microelectronics with microfluidics. The work addresses specific challenges, such as combining commercial manufacturing processes into biological systems and developing microscale sensors in these processes. This work is exemplified through a feedback-controlled microfluidic pH system to demonstrate the integration capabilities of microscale sensors for autonomous microenvironment control.
ContributorsWelch, David (Author) / Blain Christen, Jennifer (Thesis advisor) / Muthuswamy, Jitendran (Committee member) / Frakes, David (Committee member) / LaBelle, Jeffrey (Committee member) / Goryll, Michael (Committee member) / Arizona State University (Publisher)
Created2012
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Description
The design and development of analog/mixed-signal (AMS) integrated circuits (ICs) is becoming increasingly expensive, complex, and lengthy. Rapid prototyping and emulation of analog ICs will be significant in the design and testing of complex analog systems. A new approach, Programmable ANalog Device Array (PANDA) that maps any AMS design problem

The design and development of analog/mixed-signal (AMS) integrated circuits (ICs) is becoming increasingly expensive, complex, and lengthy. Rapid prototyping and emulation of analog ICs will be significant in the design and testing of complex analog systems. A new approach, Programmable ANalog Device Array (PANDA) that maps any AMS design problem to a transistor-level programmable hardware, is proposed. This approach enables fast system level validation and a reduction in post-Silicon bugs, minimizing design risk and cost. The unique features of the approach include 1) transistor-level programmability that emulates each transistor behavior in an analog design, achieving very fine granularity of reconfiguration; 2) programmable switches that are treated as a design component during analog transistor emulating, and optimized with the reconfiguration matrix; 3) compensation of AC performance degradation through boosting the bias current. Based on these principles, a digitally controlled PANDA platform is designed at 45nm node that can map AMS modules across 22nm to 90nm technology nodes. A systematic emulation approach to map any analog transistor to PANDA cell is proposed, which achieves transistor level matching accuracy of less than 5% for ID and less than 10% for Rout and Gm. Circuit level analog metrics of a voltage-controlled oscillator (VCO) emulated by PANDA, match to those of the original designs in 90nm nodes with less than a 5% error. Voltage-controlled delay lines at 65nm and 90nm are emulated by 32nm PANDA, which successfully match important analog metrics. And at-speed emulation is achieved as well. Several other 90nm analog blocks are successfully emulated by the 45nm PANDA platform, including a folded-cascode operational amplifier and a sample-and-hold module (S/H)
ContributorsXu, Cheng (Author) / Cao, Yu (Thesis advisor) / Blain Christen, Jennifer (Committee member) / Bakkaloglu, Bertan (Committee member) / Arizona State University (Publisher)
Created2012
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Description
In this thesis two methodologies have been proposed for evaluating the fault response of analog/RF circuits. These proposed approaches are used to evaluate the response of the faulty circuit in terms of specifications/measurements. Faulty response can be used to evaluate important test metrics like fail probability, fault coverage and yield

In this thesis two methodologies have been proposed for evaluating the fault response of analog/RF circuits. These proposed approaches are used to evaluate the response of the faulty circuit in terms of specifications/measurements. Faulty response can be used to evaluate important test metrics like fail probability, fault coverage and yield coverage of given measurements under process variations. Once the models for faulty and fault free circuit are generated, one needs to perform Monte Carlo sampling (as opposed to Monte Carlo simulations) to compute these statistical parameters with high accuracy. The first method is based on adaptively determining the order of the model based on the error budget in terms of computing the statistical metrics and position of the threshold(s) to decide how precisely necessary models need to be extracted. In the second method, using hierarchy in process variations a hybrid of heuristics and localized linear models have been proposed. Experiments on LNA and Mixer using the adaptive model order selection procedure can reduce the number of necessary simulations by 7.54x and 7.03x respectively in the computation of fail probability for an error budget of 2%. Experiments on LNA using the hybrid approach can reduce the number of necessary simulations by 21.9x and 17x for four and six output parameters cases for improved accuracy in test statistics estimation.
ContributorsSubrahmaniyan Radhakrishnan, Gurusubrahmaniyan (Author) / Ozev, Sule (Thesis advisor) / Blain Christen, Jennifer (Committee member) / Cao, Yu (Committee member) / Arizona State University (Publisher)
Created2010
Description
This research explores the potential use of microwave energy to detect various substances in water, with a focus on water quality assessment and pathogen detection applications. There are many non-thermal effects of microwaves on microorganisms and their resonant frequencies could be used to identify and possibly destroy harmful pathogens, such

This research explores the potential use of microwave energy to detect various substances in water, with a focus on water quality assessment and pathogen detection applications. There are many non-thermal effects of microwaves on microorganisms and their resonant frequencies could be used to identify and possibly destroy harmful pathogens, such as bacteria and viruses, without heating the water. A wide range of materials, including living organisms like Daphnia and Moina, plants, sand, plastic, and salt, were subjected to microwave measurements to assess their influence on the transmission (S21) measurements. The measurements of the living organisms did not display distinctive resonant frequencies and variations in water volume may be the source of the small measurement differences. Conversely, sand and plastic pellets affected the measurements differently, with their arrangement within the test tube emerging as a significant factor. This study also explores the impact of salinity on measurements, revealing a clear pattern that can be modeled as a series RLC resonator. Although unique resonant frequencies for the tested organisms were not identified, the presented system demonstrates the potential for detecting contaminants based on variations in measurements. Future research may extend this work to include a broader array of organisms and enhance measurement precision.
ContributorsChild, Carson (Author) / Aberle, James (Thesis director) / Blain Christen, Jennifer (Committee member) / Barrett, The Honors College (Contributor) / Electrical Engineering Program (Contributor)
Created2023-12
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Description
This work focuses on qualifying the performance of an optoelectrical measurement system designed to analyze ribonucleic acid (RNA) within a micro sample. The system is capable of measuring light intensity converted to voltage versus time and is a fast, inexpensive, and portable method for rapid detection of biologics such as

This work focuses on qualifying the performance of an optoelectrical measurement system designed to analyze ribonucleic acid (RNA) within a micro sample. The system is capable of measuring light intensity converted to voltage versus time and is a fast, inexpensive, and portable method for rapid detection of biologics such as SARS-CoV-2 virus, or Covid-19 disease. The measurement system consists of a microfluidic chip and a point of care fluorescent reader.The intent of this research is to measure consistency and robustness of the fluorescent reader combined with the microfluidic chip. The consistency and the robustness of the fluorescent reader within the duty cycle of the system power and the measurement system were analyzed with Six Sigma methods. Control charts, analysis of variance (ANOVAs), and variance components calculations were implemented to characterize the reader system. Through the process of this analysis, baseline characteristics were measured and documented providing valuable data for the improved instrument design. The existing microfluidic chip is a prototype that works in combination with the reader based on fluorescent detection. Baseline studies were required to define any issues related to microfluidic autofluorescence. Multiple designs were tested to measure reduction in autofluorescence in the microfluidics. It was found that certain designs performed better than others. One approach for improvement in the microfluidic chip may be achieved by characterizing and source controlling materials, optimizing layers, mask apertures, and mask orientations to determine reliability in the measurable output through the fluorescent reader. Since the reader and the microfluidic are designed to work together, any future studies should explore testing where the two components are considered a coupled system.
ContributorsShabtai, Bat-El (Author) / Blain Christen, Jennifer (Thesis advisor) / Abbas, James (Thesis advisor) / Maass, Eric (Committee member) / Beeman, Scott (Committee member) / Arizona State University (Publisher)
Created2021
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Description
Visual navigation is a useful and important task for a variety of applications. As the preva­lence of robots increase, there is an increasing need for energy-­efficient navigation methods as well. Many aspects of efficient visual navigation algorithms have been implemented in the lit­erature, but there is a lack of work

Visual navigation is a useful and important task for a variety of applications. As the preva­lence of robots increase, there is an increasing need for energy-­efficient navigation methods as well. Many aspects of efficient visual navigation algorithms have been implemented in the lit­erature, but there is a lack of work on evaluation of the efficiency of the image sensors. In this thesis, two methods are evaluated: adaptive image sensor quantization for traditional camera pipelines as well as new event­-based sensors for low­-power computer vision.The first contribution in this thesis is an evaluation of performing varying levels of sen­sor linear and logarithmic quantization with the task of visual simultaneous localization and mapping (SLAM). This unconventional method can provide efficiency benefits with a trade­ off between accuracy of the task and energy-­efficiency. A new sensor quantization method, gradient­-based quantization, is introduced to improve the accuracy of the task. This method only lowers the bit level of parts of the image that are less likely to be important in the SLAM algorithm since lower bit levels signify better energy­-efficiency, but worse task accuracy. The third contribution is an evaluation of the efficiency and accuracy of event­-based camera inten­sity representations for the task of optical flow. The results of performing a learning based optical flow are provided for each of five different reconstruction methods along with ablation studies. Lastly, the challenges of an event feature­-based SLAM system are presented with re­sults demonstrating the necessity for high quality and high­ resolution event data. The work in this thesis provides studies useful for examining trade­offs for an efficient visual navigation system with traditional and event vision sensors. The results of this thesis also provide multiple directions for future work.
ContributorsChristie, Olivia Catherine (Author) / Jayasuriya, Suren (Thesis advisor) / Chakrabarti, Chaitali (Committee member) / Yang, Yezhou (Committee member) / Arizona State University (Publisher)
Created2022
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Description
Nanoelectronics are electronic components that are often only a few nanometers in size. The field of nanoelectronics encompasses a wide range of products and materials that share the trait of being so small that physical forces can modify their characteristics on a nanoscale. These nanoscale devices are dominated by quantum

Nanoelectronics are electronic components that are often only a few nanometers in size. The field of nanoelectronics encompasses a wide range of products and materials that share the trait of being so small that physical forces can modify their characteristics on a nanoscale. These nanoscale devices are dominated by quantum processes including atomistic disorder and tunneling.In contrast to nanoelectronics, which involves the scaling down of devices to nanoscale levels, molecular electronics is concerned with electronic activities that take place within molecule structures. Detection of molecular conductance plays a vital role in the field of molecular electronics and nanotechnology. The ability to measure the conductive behavior of molecules is necessary to study their surface properties, defects, electronic structures, and for bio-sensing. To determine the conductance of the molecule, it is necessary to deduce the current passing through it. This is achieved by applying a voltage bias across the molecule and the detection instrument. Instruments like Scanning Tunneling Microscope (STM) and chip-based characterization (Probe Station) are used to fetch the amount of current flowing through the molecules. The current through molecules can be very small to measure and needs to be amplified. Linear amplifiers are widely used for amplifying these small currents, but due to their low dynamic range they are being replaced by logarithmic amplifiers. This thesis project aims to customize a logarithmic amplifier design to the interface with these instruments to measure the current flowing through these molecules. This thesis starts with a review of a linear- current amplifier-based technology that is used for measuring small currents and its challenges. It then introduces logarithmic amplifier for overcoming those obstacles. This thesis involves design, fabrication, and characterization of the built logarithmic amplifier. Furthermore, the setup includes a custom designed logarithmic amplifier that can be used with instruments like Scanning Tunneling Microscope (STM) and probe station. The key objective of the research is to accurately calibrate the logarithmic amplifier for measurement of currents over a wide range from picoamperes to milliamperes. Dummy resistors with different resistance values are used to replace the sample of which the conductance is to be measured, for testing and calibrating purposes. Bandwidth of the circuit is tested using these different values of resistors.
ContributorsYeole, Aishwarya Yogesh (Author) / Hihath, Josh (Thesis advisor) / Blain Christen, Jennifer (Committee member) / Goryll, Michael (Committee member) / Arizona State University (Publisher)
Created2024
Description
ABSTRACT

Designers creating the next generation remote sensing enabled smart devices need to overcome the challenges of prevailing ventures including time to market and expense.

To reduce the time and effort involved in initial prototyping, a good reference design is often desired and warranted. This paper provides the necessary reference materials

ABSTRACT

Designers creating the next generation remote sensing enabled smart devices need to overcome the challenges of prevailing ventures including time to market and expense.

To reduce the time and effort involved in initial prototyping, a good reference design is often desired and warranted. This paper provides the necessary reference materials for Designers to implement a wireless solution efficiently and effectively.

This document is intended for users with limited Bluetooth technology experience.

Many sensing-enabled devices require a ‘hard-wire’ or cable link to a host monitoring system. This can limit the potential for product advancements by anchoring the system to a single location preventing portability and the convenience of a remote system. By removing the “wired” or cabled portion from a design, a broader scope of devices becomes feasible.

One common problematic area for these types of sensors is within the internal medicine field. Proximity sensing is far more practical and less invasive to implement than surgical implantation. Bluetooth Low Energy (BLE) systems solve the hard wired problem by decoupling the physical sensor from the host system through a BLE transceiver that can send information to an external monitoring system. This wireless link enables new sensor technology to be leveraged into previously unobtainable markets; such as, internal medicine, wearable devices, and Infotainment to name a few. Wireless technology for sensor systems are a potentially disruptive technology changing the way environmental monitoring is implemented and considered.

With this BLE design reference, products can be created with new capabilities to advance current technologies for military, commercial, industrial and medical sectors in rapid succession.
ContributorsHughes, Clinton Francis (Author) / Blain Christen, Jennifer (Thesis advisor) / Ozev, Sule (Committee member) / Ogras, Umit Y. (Committee member) / Aberle, James T., 1961- (Committee member) / Arizona State University (Publisher)
Created2015
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Description
The microelectronics technology has seen a tremendous growth over the past sixty years. The advancements in microelectronics, which shows the capability of yielding highly reliable and reproducible structures, have made the mass production of integrated electronic components feasible. Miniaturized, low-cost, and accurate sensors became available due to the rise of

The microelectronics technology has seen a tremendous growth over the past sixty years. The advancements in microelectronics, which shows the capability of yielding highly reliable and reproducible structures, have made the mass production of integrated electronic components feasible. Miniaturized, low-cost, and accurate sensors became available due to the rise of the microelectronics industry. A variety of sensors are being used extensively in many portable applications. These sensors are promising not only in research area but also in daily routine applications.

However, many sensing systems are relatively bulky, complicated, and expensive and main advantages of new sensors do not play an important role in practical applications. Many challenges arise due to intricacies for sensor packaging, especially operation in a solution environment. Additional problems emerge when interfacing sensors with external off-chip components. A large amount of research in the field of sensors has been focused on how to improve the system integration.

This work presents new methods for the design, fabrication, and integration of sensor systems. This thesis addresses these challenges, for example, interfacing microelectronic system to a liquid environment and developing a new technique for impedimetric measurement. This work also shows a new design for on-chip optical sensor without any other extra components or post-processing.
ContributorsLuo, Tao (Author) / Blain Christen, Jennifer (Thesis advisor) / Song, Hongjiang (Committee member) / Goryll, Michael (Committee member) / Yu, Hongbin (Committee member) / Arizona State University (Publisher)
Created2015