Matching Items (19)
Description
As the detection of planets become commonplace around our neighboring stars, scientists can now begin exploring their possible properties and habitability. Using statistical analysis I determine a true range of elemental compositions amongst local stars and how this variation could affect possible planetary systems. Through calculating and analyzing the variation in elemental abundances of nearby stars, the actual range in stellar abundances can be determined using statistical methods. This research emphasizes the diversity of stellar elemental abundances and how that could affect the environment from which planets form. An intrinsic variation has been found to exist for almost all of the elements studied by most abundance-finding groups. Specifically, this research determines abundances for a set of 458 F, G, and K stars from spectroscopic planet hunting surveys for 27 elements, including: C, O, Na, Mg, Al, Si, S, Ca, Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Y, Zr, Mo, Ba, La, Ce, Nd, Eu, and Hf. Abundances of the elements in many known exosolar planet host stars are calculated for the purpose investigating new ways to visualize how stellar abundances could affect planetary systems, planetary formation, and mineralogy. I explore the Mg/Si and C/O ratios as well as place these abundances on ternary diagrams with Fe. Lastly, I emphasize the unusual stellar abundance of τ Ceti. τ Ceti is measured to have 5 planets of Super-Earth masses orbiting in near habitable zone distances. Spectroscopic analysis finds that the Mg/Si ratio is extremely high (~2) for this star, which could lead to alterations in planetary properties. τ Ceti's low metallicity and oxygen abundance account for a change in the location of the traditional habitable zone, which helps clarify a new definition of habitable planets.
ContributorsPagano, Michael (Author) / Young, Patrick (Thesis advisor) / Shim, Sang-Heon (Committee member) / Patience, Jennifer (Committee member) / Desch, Steven (Committee member) / Anbar, Ariel (Committee member) / Arizona State University (Publisher)
Created2014
Description
The origin of Life on Earth is the greatest unsolved mystery in the history of science. In spite of progress in almost every scientific endeavor, we still have no clear theory, model, or framework to understand the processes that led to the emergence of life on Earth. Understanding such a processes would provide key insights into astrobiology, planetary science, geochemistry, evolutionary biology, physics, and philosophy. To date, most research on the origin of life has focused on characterizing and synthesizing the molecular building blocks of living systems. This bottom-up approach assumes that living systems are characterized by their component parts, however many of the essential features of life are system level properties which only manifest in the collective behavior of many components. In order to make progress towards solving the origin of life new modeling techniques are needed. In this dissertation I review historical approaches to modeling the origin of life. I proceed to elaborate on new approaches to understanding biology that are derived from statistical physics and prioritize the collective properties of living systems rather than the component parts. In order to study these collective properties of living systems, I develop computational models of chemical systems. Using these computational models I characterize several system level processes which have important implications for understanding the origin of life on Earth. First, I investigate a model of molecular replicators and demonstrate the existence of a phase transition which occurs dynamically in replicating systems. I characterize the properties of the phase transition and argue that living systems can be understood as a non-equilibrium state of matter with unique dynamical properties. Then I develop a model of molecular assembly based on a ribonucleic acid (RNA) system, which has been characterized in laboratory experiments. Using this model I demonstrate how the energetic properties of hydrogen bonding dictate the population level dynamics of that RNA system. Finally I return to a model of replication in which replicators are strongly coupled to their environment. I demonstrate that this dynamic coupling results in qualitatively different evolutionary dynamics than those expected in static environments. A key difference is that when environmental coupling is included, evolutionary processes do not select a single replicating species but rather a dynamically stable community which consists of many species. Finally, I conclude with a discussion of how these computational models can inform future research on the origins of life.
ContributorsMathis, Cole (Nicholas) (Author) / Walker, Sara I (Thesis advisor) / Davies, Paul CW (Committee member) / Chamberlin, Ralph V (Committee member) / Lachmann, Michael (Committee member) / Arizona State University (Publisher)
Created2018
Description
Biochemical reactions underlie all living processes. Their complex web of interactions is difficult to fully capture and quantify with simple mathematical objects. Applying network science to biology has advanced our understanding of the metabolisms of individual organisms and the organization of ecosystems, but has scarcely been applied to life at a planetary scale. To characterize planetary-scale biochemistry, I constructed biochemical networks using global databases of annotated genomes and metagenomes, and biochemical reactions. I uncover scaling laws governing biochemical diversity and network structure shared across levels of organization from individuals to ecosystems, to the biosphere as a whole. Comparing real biochemical reaction networks to random reaction networks reveals the observed biological scaling is not a product of chemistry alone, but instead emerges due to the particular structure of selected reactions commonly participating in living processes. I perform distinguishability tests across properties of individual and ecosystem-level biochemical networks to determine whether or not they share common structure, indicative of common generative mechanisms across levels. My results indicate there is no sharp transition in the organization of biochemistry across distinct levels of the biological hierarchy—a result that holds across different network projections.
Finally, I leverage these large biochemical datasets, in conjunction with planetary observations and computational tools, to provide a methodological foundation for the quantitative assessment of biology’s viability amongst other geospheres. Investigating a case study of alkaliphilic prokaryotes in the context of Enceladus, I find that the chemical compounds observed on Enceladus thus far would be insufficient to allow even these extremophiles to produce the compounds necessary to sustain a viable metabolism. The environmental precursors required by these organisms provides a reference for the compounds which should be prioritized for detection in future planetary exploration missions. The results of this framework have further consequences in the context of planetary protection, and hint that forward contamination may prove infeasible without meticulous intent. Taken together these results point to a deeper level of organization in biochemical networks than what has been understood so far, and suggests the existence of common organizing principles operating across different levels of biology and planetary chemistry.
Finally, I leverage these large biochemical datasets, in conjunction with planetary observations and computational tools, to provide a methodological foundation for the quantitative assessment of biology’s viability amongst other geospheres. Investigating a case study of alkaliphilic prokaryotes in the context of Enceladus, I find that the chemical compounds observed on Enceladus thus far would be insufficient to allow even these extremophiles to produce the compounds necessary to sustain a viable metabolism. The environmental precursors required by these organisms provides a reference for the compounds which should be prioritized for detection in future planetary exploration missions. The results of this framework have further consequences in the context of planetary protection, and hint that forward contamination may prove infeasible without meticulous intent. Taken together these results point to a deeper level of organization in biochemical networks than what has been understood so far, and suggests the existence of common organizing principles operating across different levels of biology and planetary chemistry.
ContributorsSmith, Harrison Brodsky (Author) / Walker, Sara I (Thesis advisor) / Anbar, Ariel D (Committee member) / Line, Michael R (Committee member) / Okie, Jordan G. (Committee member) / Romaniello, Stephen J. (Committee member) / Arizona State University (Publisher)
Created2018
Description
The search for life on Mars is a major NASA priority. A Mars Sample Return
(MSR) mission, Mars 2020, will be NASA's next step towards this goal, carrying an instrument suite that can identify samples containing potential biosignatures. Those samples will be later returned to Earth for detailed analysis. This dissertation is intended to inform strategies for fossil biosignature detection in Mars analog samples targeted for their high biosignature preservation potential (BPP) using in situ rover-based instruments. In chapter 2, I assessed the diagenesis and BPP of one relevant analog habitable Martian environment: a playa evaporite sequence within the Verde Formation, Arizona. Coupling outcrop-scale observations with laboratory analyses, results revealed four diagenetic pathways, each with distinct impacts on BPP. When MSR occurs, the sample mass returned will be restricted, highlighting the importance of developing instruments that can select the most promising samples for MSR. Raman spectroscopy is one favored technique for this purpose. Three Raman instruments will be sent onboard two upcoming Mars rover missions for the first time. In chapters 3-4, I investigated the challenges of Raman to identify samples for MSR. I examined two Raman systems, each optimized in a different way to mitigate a major problem commonly suffered by Raman instruments: background fluorescence. In Chapter 3, I focused on visible laser excitation wavelength (532 nm) gated (or time-resolved Raman, TRR) spectroscopy. Results showed occasional improvement over conventional Raman for mitigating fluorescence in samples. It was hypothesized that results were wavelength-dependent and that greater fluorescence reduction was possible with UV laser excitation. In Chapter 4, I tested this hypothesis with a time-resolved UV (266 nm) gated Raman and UV fluorescence spectroscopy capability. I acquired Raman and fluorescence data sets on samples and showed that the UV system enabled identifications of minerals and biosignatures in samples with high confidence. The results obtained in this dissertation may inform approaches for MSR by: (1) refining models for biosignature preservation in habitable Mars environments; (2) improving sample selection and caching strategies, which may increase the success of Earth-based biogenicity studies; and (3) informing the development of Raman instruments for upcoming rover-based missions.
(MSR) mission, Mars 2020, will be NASA's next step towards this goal, carrying an instrument suite that can identify samples containing potential biosignatures. Those samples will be later returned to Earth for detailed analysis. This dissertation is intended to inform strategies for fossil biosignature detection in Mars analog samples targeted for their high biosignature preservation potential (BPP) using in situ rover-based instruments. In chapter 2, I assessed the diagenesis and BPP of one relevant analog habitable Martian environment: a playa evaporite sequence within the Verde Formation, Arizona. Coupling outcrop-scale observations with laboratory analyses, results revealed four diagenetic pathways, each with distinct impacts on BPP. When MSR occurs, the sample mass returned will be restricted, highlighting the importance of developing instruments that can select the most promising samples for MSR. Raman spectroscopy is one favored technique for this purpose. Three Raman instruments will be sent onboard two upcoming Mars rover missions for the first time. In chapters 3-4, I investigated the challenges of Raman to identify samples for MSR. I examined two Raman systems, each optimized in a different way to mitigate a major problem commonly suffered by Raman instruments: background fluorescence. In Chapter 3, I focused on visible laser excitation wavelength (532 nm) gated (or time-resolved Raman, TRR) spectroscopy. Results showed occasional improvement over conventional Raman for mitigating fluorescence in samples. It was hypothesized that results were wavelength-dependent and that greater fluorescence reduction was possible with UV laser excitation. In Chapter 4, I tested this hypothesis with a time-resolved UV (266 nm) gated Raman and UV fluorescence spectroscopy capability. I acquired Raman and fluorescence data sets on samples and showed that the UV system enabled identifications of minerals and biosignatures in samples with high confidence. The results obtained in this dissertation may inform approaches for MSR by: (1) refining models for biosignature preservation in habitable Mars environments; (2) improving sample selection and caching strategies, which may increase the success of Earth-based biogenicity studies; and (3) informing the development of Raman instruments for upcoming rover-based missions.
ContributorsShkolyar, Svetlana (Author) / Farmer, Jack (Thesis advisor) / Semken, Steven (Committee member) / Sharp, Thomas (Committee member) / Shim, Sang-Heon Dan (Committee member) / Youngbull, Aaron Cody (Committee member) / Arizona State University (Publisher)
Created2016
Description
The Jovian moon Europa's putative subsurface ocean offers one of the closest astrobiological targets for future exploration. It’s geologically young surface with a wide array of surface features aligned with distinct surface composition suggests past/present geophysical activity with implications for habitability. In this body of work, I propose a hypothesis for material transport from the ocean towards the surface via a convecting ice-shell. Geodynamical modeling is used to perform numerical experiments on a two-phase water-ice system to test the hypotheses. From these models, I conclude that it is possible for trace oceanic chemistry, entrapped into the newly forming ice at the ice-ocean phase interface, to reach near-surface. This new ice is advected across the ice-shell and towards the surface affirming a dynamical possibility for material transport across the ice-ocean system, of significance to astrobiological prospecting. Next, I use these self-consistent ice-ocean models to study the thickening of ice-shell over time. Europa is subject to the immense gravity field of Jupiter that generates tidal heating within the moon. Analysis of cases with uniform and localized internal tidal heating reveal that as the ice-shell grows from a warm initial ocean, there is an increase in the size of convection cells which causes a dramatic increase in the growth rate of the ice-shell. Addition of sufficient amount of heat also results in an ice-shell at an equilibrium thickness. Localization of tidal heating as a function of viscosity controls the equilibrium thickness. These models are then used to understand how compositional heterogeneity can be created in a growing ice-shell. Impurities (e.g. salts on the surface) that enter the ice-shell get trapped in the thickening ice-shell by freezing. I show the distribution pattern of heterogeneities that can form within the ice-shell at different times. This may be of potential application in identifying the longevity and mobility of brine pockets in Europa's ice-shell which are thought to be potential habitable niches.
ContributorsAllu Peddinti, Divya (Author) / McNamara, Allen Keith (Thesis advisor) / Garnero, Edward (Committee member) / Desch, Steven (Committee member) / Zolotov, Mikhail (Committee member) / Clarke, Amanda (Committee member) / Arizona State University (Publisher)
Created2017
Description
Assembly theory as a way of defining the biotic/abiotic boundary has been established for molecules, but not yet for crystal structures. This is an assembly algorithm that calculates the complexity of biotic and abiotic minerals in order to constrain the quantitative fundamentals of "life". The calculation utilizes the Hermann-Mauguin space group symmetry and Wyckoff sites of mineral unit cells to calculate the path-building complexity of a crystal structure. 5,644 minerals from the American Mineralogist COD database were run through the algorithm. The five structures with the highest information complexity were a mix of biotic and abiotic minerals, indicating that further calculations on larger datasets would be pertinent. Furthermore, an expansion of the definition of mineral to include biotically synthesized solids would further research efforts aimed at using minerals as possible biomarkers.
ContributorsSharma, Sonakshi (Author) / Walker, Sara (Thesis director) / Malloy, John (Committee member) / Bromley, Megan (Committee member) / Millsaps, Camerian (Committee member) / Barrett, The Honors College (Contributor) / School of Life Sciences (Contributor) / School of Earth and Space Exploration (Contributor)
Created2023-05
Description
During the Dawn mission, bright spots were discovered on the surface of the dwarf planet Ceres, which were determined to be evaporite deposits of sodium carbonate, ammonium carbonate, and hydrohalite. These deposits are significant because they indicate the presence of subsurface water and potential geologic activity on Ceres. These evaporites form from the brine-water mixture in the deep Ceres reservoir, which likely possesses the conditions ideal for forming complex organics. Here, we report the results of a suite of laboratory techniques (CHN Elemental Analyzer, Secondary Ion Mass Spectrometry, Fourier-Transform Infrared Spectroscopy, Gas Chromatography, and Brunauer-Emmett-Teller Analysis) for quantifying the likelihood of primordial carbon survival and distribution in analog materials found on Ceres, particularly in salt evaporates. We are specifically looking at if the amino acid glycine can be preserved in sodium chloride crystals. Our results conclude that if the Ceres brine reservoir is saturated with organics, and with the lower limits that we have for our instrumentation thus far, these techniques should be more than sufficient to measure glycine content should we ever receive samples from Ceres.
ContributorsReynoso, Lucas (Author) / Bose, Maitrayee (Thesis director) / Castillo-Rogez, Julie (Committee member) / Barrett, The Honors College (Contributor) / Mechanical and Aerospace Engineering Program (Contributor) / School of Earth and Space Exploration (Contributor)
Created2023-05
Description
I present a catalog of 1,794 stellar evolution models for solar-type and low-mass stars, which is intended to help characterize real host-stars of interest during the ongoing search for potentially habitable exoplanets. The main grid is composed of 904 tracks, for 0.5-1.2 M_sol at scaled metallicity values of 0.1-1.5 Z_sol and specific elemental abundance ratio values of 0.44-2.28 O/Fe_sol, 0.58-1.72 C/Fe_sol, 0.54-1.84 Mg/Fe_sol, and 0.5-2.0 Ne/Fe_sol. The catalog includes a small grid of late stage evolutionary tracks (25 models), as well as a grid of M-dwarf stars for 0.1-0.45 M_sol (856 models). The time-dependent habitable zone evolution is calculated for each track, and is strongly dependent on stellar mass, effective temperature, and luminosity parameterizations. I have also developed a subroutine for the stellar evolution code TYCHO that implements a minimalist coupled model for estimating changes in the stellar X-ray luminosity, mass loss, rotational velocity, and magnetic activity over time; to test the utility of the updated code, I created a small grid (9 models) for solar-mass stars, with variations in rotational velocity and scaled metallicity. Including this kind of information in the catalog will ultimately allow for a more robust consideration of the long-term conditions that orbiting planets may experience.
In order to gauge the true habitability potential of a given planetary system, it is extremely important to characterize the host-star's mass, specific chemical composition, and thus the timescale over which the star will evolve. It is also necessary to assess the likelihood that a planet found in the "instantaneous" habitable zone has actually had sufficient time to become "detectably" habitable. This catalog provides accurate stellar evolution predictions for a large collection of theoretical host-stars; the models are of particular utility in that they represent the real variation in stellar parameters that have been observed in nearby stars.
In order to gauge the true habitability potential of a given planetary system, it is extremely important to characterize the host-star's mass, specific chemical composition, and thus the timescale over which the star will evolve. It is also necessary to assess the likelihood that a planet found in the "instantaneous" habitable zone has actually had sufficient time to become "detectably" habitable. This catalog provides accurate stellar evolution predictions for a large collection of theoretical host-stars; the models are of particular utility in that they represent the real variation in stellar parameters that have been observed in nearby stars.
ContributorsTruitt, Amanda Rosendall (Author) / Young, Patrick (Thesis advisor) / Anbar, Ariel (Committee member) / Desch, Steven (Committee member) / Patience, Jennifer (Committee member) / Shkolnik, Evgenya (Committee member) / Arizona State University (Publisher)
Created2017
Description
The origin of life remains unknowable to current science. Scientists cannot see into the origin of life on Earth, and until humanity discovers life elsewhere in the universe and begin to compare this alien life to Earth, it is likely to be undiscoverable. However, alien life may be so different from life as it is currently known that it may not be recognizable when it is found. Therefore, astrobiology needs a universal theory for life to avoid detection methods being biased towards Earth-based life. This also extends to the instrumentation sent into space, which should be built to detect universal properties of life. Assembly theory, a novel measure of complexity and arguably the only testable agnostic biosignature in current science, is used here to provide precision requirements for mass spectrometry instrumentation on future spaceflight missions with the goal of finding life elsewhere. Universal properties are not only applicable to the origins of life, but also to technologically advanced societies. Predictable patterns are found in today’s industrially based society, such as energy usage as a function of population density. These patterns may serve as the basis for technosignatures that are evidence of advanced extraterrestrial civilizations. Patters found in patent chemistry are explored, as well as predictions of chemical complexity based on assembly theory, to determine how complex chemistry is built by human society and which statistical patterns may be found in extraterrestrial civilizations. Moving beyond astrobiology, science cannot be done in a vacuum but must be communicated and taught to others. Topics such as a universal definition of life, biosignatures, and increasing complexity mean nothing without interest and engagement from others, particularly students. To this end, transformative pedagogical tools are used, particularly sociotransformative constructivism (sTc), to build and teach an Earth Science and Astrobiology curriculum to a classroom of high school incarcerated students. The impact of this class on their science learning and how they personally identify as scientists is studied.
ContributorsMalloy, John (Author) / Walker, Sara (Thesis advisor) / Reano, Darryl (Committee member) / Hartnett, Hilairy (Committee member) / Trembath-Reichert, Elizabeth (Committee member) / Cronin, Leroy (Committee member) / Arizona State University (Publisher)
Created2023
Description
Finding habitable worlds is a key driver of solar system exploration. Many solar
system missions seek environments providing liquid water, energy, and nutrients, the three ingredients necessary to sustain life.
Such environments include hydrothermal systems, spatially-confined systems where hot aqueous fluid circulates through rock by convection. I sought to characterize hydrothermal microbial communities, collected in hot spring sediments and mats at Yellowstone National Park, USA, by measuring their bulk elemental composition. To do so, one must minimize the contribution of non-biological material to the samples analyzed. I demonstrate that this can be achieved using a separation method that takes advantage of the density contrast between cells and sediment and preserves cellular elemental contents. Using this method, I show that in spite of the tremendous physical, chemical, and taxonomic diversity of Yellowstone hot springs, the composition of microorganisms there is surprisingly ordinary. This suggests the existence of a stoichiometric envelope common to all life as we know it. Thus, future planetary investigations could use elemental fingerprints to assess the astrobiological potential of hydrothermal settings beyond Earth.
Indeed, hydrothermal activity may be widespread in the solar system. Most solar system worlds larger than 200 km in radius are dwarf planets, likely composed of an icy, cometary mantle surrounding a rocky, chondritic core. I enhance a dwarf planet evolution code, including the effects of core fracturing and hydrothermal circulation, to demonstrate that dwarf planets likely have undergone extensive water-rock interaction. This supports observations of aqueous products on their surfaces. I simulate the alteration of chondritic rock by pure water or cometary fluid to show that aqueous alteration feeds back on geophysical evolution: it modifies the fluid antifreeze content, affecting its persistence over geological timescales; and the distribution of radionuclides, whose decay is a chief heat source on dwarf planets. Interaction products can be observed if transported to the surface. I simulate numerically how cryovolcanic transport is enabled by primordial and hydrothermal volatile exsolution. Cryovolcanism seems plausible on dwarf planets in light of images recently returned by spacecrafts. Thus, these coupled geophysical-geochemical models provide a comprehensive picture of dwarf planet evolution, processes, and habitability.
system missions seek environments providing liquid water, energy, and nutrients, the three ingredients necessary to sustain life.
Such environments include hydrothermal systems, spatially-confined systems where hot aqueous fluid circulates through rock by convection. I sought to characterize hydrothermal microbial communities, collected in hot spring sediments and mats at Yellowstone National Park, USA, by measuring their bulk elemental composition. To do so, one must minimize the contribution of non-biological material to the samples analyzed. I demonstrate that this can be achieved using a separation method that takes advantage of the density contrast between cells and sediment and preserves cellular elemental contents. Using this method, I show that in spite of the tremendous physical, chemical, and taxonomic diversity of Yellowstone hot springs, the composition of microorganisms there is surprisingly ordinary. This suggests the existence of a stoichiometric envelope common to all life as we know it. Thus, future planetary investigations could use elemental fingerprints to assess the astrobiological potential of hydrothermal settings beyond Earth.
Indeed, hydrothermal activity may be widespread in the solar system. Most solar system worlds larger than 200 km in radius are dwarf planets, likely composed of an icy, cometary mantle surrounding a rocky, chondritic core. I enhance a dwarf planet evolution code, including the effects of core fracturing and hydrothermal circulation, to demonstrate that dwarf planets likely have undergone extensive water-rock interaction. This supports observations of aqueous products on their surfaces. I simulate the alteration of chondritic rock by pure water or cometary fluid to show that aqueous alteration feeds back on geophysical evolution: it modifies the fluid antifreeze content, affecting its persistence over geological timescales; and the distribution of radionuclides, whose decay is a chief heat source on dwarf planets. Interaction products can be observed if transported to the surface. I simulate numerically how cryovolcanic transport is enabled by primordial and hydrothermal volatile exsolution. Cryovolcanism seems plausible on dwarf planets in light of images recently returned by spacecrafts. Thus, these coupled geophysical-geochemical models provide a comprehensive picture of dwarf planet evolution, processes, and habitability.
ContributorsNeveu, Marc François Laurent (Author) / Desch, Steven J (Thesis advisor) / Anbar, Ariel D (Thesis advisor) / Shock, Everett L (Committee member) / Elser, James J (Committee member) / McNamara, Allen K (Committee member) / Arizona State University (Publisher)
Created2015