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Whistleblowing in Biomedical Research and Medicine: An Analysis of Ethical Expectations and Dilemmas
Description
In biomedical research institutions and medical institutions alike, whistleblowing, or the reporting of misconduct, has been severely retaliated against. Whistleblowers report misconduct by adhering to institutional whistleblowing policies, and do so in order to maintain ethical practice within their institution; it is important to note that by taking this ethical action, whistleblowers are aiming to protect the future of biomedical research and medicine. Despite these intentions, whistleblowing has developed a negative stigma due to the misconception that whistleblowers have self-proclaimed authority and are unable to function as part of a team. The retaliation against whistleblowers has been connected to psychological and professional fallout for the whistleblower, and it has been found that many whistleblowers suffer as a direct result of a lack of institutional support. The problems with whistleblowing culture demonstrate issues surrounding how ethics are maintained in institutions, who ethics policies apply to, and who has authority. The retaliation seen against whistleblowers outlines inherent institutional failures, and highlights the need for institutional change in order to both promote ethical practice and protect the whistleblowers who adhere to ethics policies. This thesis discusses such failures in detail, and outlines several broad solutions in order to combat this issue.
ContributorsTaylor, Kylee Anne (Author) / Robert, Jason (Thesis director) / Ellison, Karin (Committee member) / Johnson, Nate (Committee member) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
In our exponentially expanding world, the knowledge of a group versus that of an individual is more relevant than ever. Social insects have evolved to rely on the information from the collective, and in the case of harvester ants, their choice revolves around the best seeds to collect.
The objective of this experiment is to study a colony’s seed preference following previous exposure to a seed type in the seed harvester ant Pogonomyrmex californicus. It was hypothesized that foragers would demonstrate a measurable preference for the seed type they had previously experienced over the novel seed type. The cuticular hydrocarbon profile is suspected to be an influence in the foragers’ seed selection. Following an incubation period with the designated seed type, a series of preference trials were conducted over the course of two days for two experiments in which each colony fragment was given a seed pile with a 1:1 ratio of niger and sesame, after which any seeds moved off the seed pile were determined to be chosen, as well as if the workers were observed moving the seeds off the pile from the video recordings. Using video recordings, the seed selections of individual foragers were also tracked. The results partially support the hypothesis, however, in some cases, the ants did not collect enough seeds for the preference to be significant, and not all colony fragments had preferences that lined up with what they had previously experienced according to their treatment. Familiarity with the hydrocarbon profile of the seed type the colony had experienced is a possible proximal explanation for why colonies had seed preferences that aligned with their treatment, the seed they were designated to experience. Due to the low quantity of seeds collected during preference trials, seed preference amongst individual foragers remains unclear due to many different foragers selecting a seed during only one trial, with very few foragers returning to forage for seeds over the course of the experiment.
The objective of this experiment is to study a colony’s seed preference following previous exposure to a seed type in the seed harvester ant Pogonomyrmex californicus. It was hypothesized that foragers would demonstrate a measurable preference for the seed type they had previously experienced over the novel seed type. The cuticular hydrocarbon profile is suspected to be an influence in the foragers’ seed selection. Following an incubation period with the designated seed type, a series of preference trials were conducted over the course of two days for two experiments in which each colony fragment was given a seed pile with a 1:1 ratio of niger and sesame, after which any seeds moved off the seed pile were determined to be chosen, as well as if the workers were observed moving the seeds off the pile from the video recordings. Using video recordings, the seed selections of individual foragers were also tracked. The results partially support the hypothesis, however, in some cases, the ants did not collect enough seeds for the preference to be significant, and not all colony fragments had preferences that lined up with what they had previously experienced according to their treatment. Familiarity with the hydrocarbon profile of the seed type the colony had experienced is a possible proximal explanation for why colonies had seed preferences that aligned with their treatment, the seed they were designated to experience. Due to the low quantity of seeds collected during preference trials, seed preference amongst individual foragers remains unclear due to many different foragers selecting a seed during only one trial, with very few foragers returning to forage for seeds over the course of the experiment.
ContributorsNewton, Natalie Nicole (Author) / Fewell, Jennifer (Thesis director) / Steven, Pratt (Committee member) / Ioulia, Bespalova (Committee member) / School of Art (Contributor) / School of Life Sciences (Contributor) / School of International Letters and Cultures (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
Many young people from The Gambia have been migrating illegally by routes through the desert to get to Libya and across the Mediterranean Sea to get to Italy. This is called back-way migration. A fair number of articles have been written that focus on the migrants leaving; however, the story that is not being told as often is about the families they leave behind. This thesis seeks to explore the everyday problems that occur to the families left behind and the country at large, as a result of the mass exodus of young people.
ContributorsDaramy, Mohammed K (Author) / Bhattacharjya, Nilanjana (Thesis director) / Shaw-Smith, Lynette (Committee member) / School of Sustainability (Contributor) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
The number of cancer survivors in the United States is growing rapidly and it is expected to double by 2040. Arizona is nationally ranked with the 14th highest number of survivors, many of which experience a wide range of persisting medical complications that result from the cancer and associated treatment. Consequently, there is an increased need for services tailored to the health and wellness of survivors. Studies have shown that exercise rehabilitation is effective in improving the physical and mental health of this patient population. This project aimed to investigate the status of medically-based exercise rehabilitation for cancer survivors in Arizona. It focused on services offered by cancer treatment centers and cardiac rehabilitation clinics, with cardiac rehabilitation providing a possible delivery method for future cancer exercise rehabilitation. A directory of resources was compiled based on responses to structured telephone interviews with the cancer treatment centers (n=32) and cardiac rehabilitation clinics (n=34) within the state. The directory will serve as a resource for both patients and clinicians by identifying statewide related services that are available at the medical institutions and within the community. Results showed that 42.9% and 39.4% of the cancer treatment centers and cardiac rehabilitation clinics, respectively, offered exercise related services for cancer survivors. 78.6% of cancer centers stated that they refer cancer survivors to physical therapy, while only 35.7% refer survivors to community-based programs. Only 2 cardiac rehabilitation clinics, or 6%, offered preventative cardiology exercise consultations to cancer survivors. In conclusion, rehabilitative exercise resources for cancer survivors in Arizona were limited. Additional cancer rehabilitation efficacy studies are needed to further clarify evidence-based practice guidelines and provide direction for optimal methods of healthcare delivery. It is recommended that this directory remains current with routine updates in an effort to increase patient accessibility to care.
ContributorsHitt, Ellen (Author) / Scales, Robert (Thesis director) / Huberty, Jennifer (Committee member) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-12
Description
In my path through both the academic and the professional music world, I have realized that violinists traditionally operate in a very limited role when it comes to pop music. Rarely are string players integral to a song, and rarely are they allowed to indulge in creativity or improvisation. This three-track EP explores the various roles and functions that both the violin and the 21st-century violinist can have, beyond the stereotypical string pads in ballads and non-rhythmic, chordal accompaniment. The first track explores the violin providing chordal and rhythmic foundation of a song, containing only vocals and a midi bass as non-violin elements. The second track investigates the importance of production skills and strings providing the melody for a groove based up-tempo electronic drop. The final track is a more traditional yet accessible composition for piano and string quartet, inspired by the work of Ólafur Arnalds and Max Richter, potentially viable for modern dance choreography. The process of writing, recording, and producing this EP served as my first legitimate foray into the professional songwriting world. It is a testament to my battle with, and a temporary victory over, toxic perfectionism. This is an affliction that befalls creators of all trades: the crippling fear of putting out something less than perfect resulting in nothing being put out at all. Finally, I have put something out, something I am solely responsible for, that represent my original creative work. This EP seeks to set a blueprint for the capabilities of modern string playing and modern string players often neglected in the modern popular music sphere. It is the culmination of all I have learned as a musician, technically, professionally, and emotionally.
ContributorsHerbst, Felix Benjamin (Author) / McLin, Katherine (Thesis director) / Peña, Samuel (Committee member) / School of Music (Contributor) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-12
Description
Human activities around the world are threatening scores of wildlife species, pushing them closer to extinction. In order to address what many conservationists view as a global biodiversity crisis, it is vital that more people are inspired to care about wild animals and motivated to act in ways that help protect them. The up-close experiences and personal connections that people form with wild animals in zoos accredited by the Association of Zoos and Aquariums (AZA) or the World Association of Zoos and Aquariums (WAZA) can help achieve this. However, it is not very well understood how different types of encounters within these zoos may inspire conservation mindedness and pro-environmental behaviors. During this thesis project, surveys were conducted at the AZA-accredited Arizona Center for Nature Conservation/Phoenix Zoo to understand how interactive, hands-on animal experiences within zoos differ from passively viewing zoo animals when it comes to inspiring people to care about conservation. The Phoenix Zoo is home to two different species of giraffes, and guests can view them from the front of the Savanna Exhibit. Guests can also participate in the Giraffe Encounter, which is a much more interactive, hands-on experience. After surveying guests at both locations, the results showed that fewer people at the Giraffe Encounter responded that they often engage in pro-environmental behaviors. This may indicate that the people who participated in the Giraffe Encounter came to the zoo more for recreation and entertainment than to learn about wildlife. Despite this, more people learned something new about nature or conservation at the Giraffe Encounter than they did at the Savanna Exhibit. On average, guests also felt that the Giraffe Encounter motivated them to learn more about how to help animals in the wild than the Savanna Exhibit did. Overall, there is a strong correlation between having an interactive, hands-on experience with a zoo animal and caring more about wildlife conservation. However, more research still needs to be done in order to conclusively provide evidence for causation.
ContributorsBurgess, Christa Noell (Author) / Schoon, Michael (Thesis director) / Minteer, Ben (Committee member) / Allard, Ruth (Committee member) / School of Life Sciences (Contributor) / School of Sustainability (Contributor, Contributor) / Barrett, The Honors College (Contributor)
Created2019-12
Description
Cancer is a disease in which abnormal cells divide uncontrollably and destroy body tissue, and currently plagues today’s world. Carcinomas are cancers derived from epithelial cells and include breast and prostate cancer. Breast cancer is a type of carcinoma that forms in breast tissue cells. The tumor cells can be further categorized after testing the cells for the presence of certain molecules. Hormone receptor positive breast cancer includes the tumor cells with receptors that respond to the steroid hormones, estrogen and progesterone, or the peptide hormone, HER2. These forms of cancer respond well to chemotherapy and endocrine therapy. On the other hand, triple negative breast cancer (TNBC) is characterized by the lack of hormone receptor expression and tends to have a worse prognosis in women. Prostate cancer forms in the cells of the prostate gland and has been attributed to mutations in androgen receptor ligand specificity. In a subset of triple negative breast cancer, genetic expression profiling has found a luminal androgen receptor that is dependent on androgen signaling. TNBC has also been found to respond well to enzalutamide, a an androgen receptor inhibitor. As the gene of the androgen receptor, AR, is located on the X chromosome and expressed in a variety of tissues, the responsiveness of TNBC to androgen receptor inhibition could be due to the differential usage of isoforms - different gene mRNA transcripts that produce different proteins. Thus, this study analyzed differential gene expression and differential isoform usage between TNBC cancers – that do and do not express the androgen receptor – and prostate cancer in order to better understand the underlying mechanism behind the effectiveness of androgen receptor inhibition in TNBC. Through the analysis of differential gene expression between the TNBC AR+ and AR- conditions, it was found that seven genes are significantly differentially expressed between the two types of tissues. Genes of significance are AR and EN1, which was found to be a potential prognostic marker in a subtype of TNBC. While some genes are differentially expressed between the TNBC AR+ and AR- tissues, the differences in isoform expression between the two tissues do not reflect the difference in gene expression. We discovered 11 genes that exhibited significant isoform switching between AR+ and AR- TNBC and have been found to contribute to cancer characteristics. The genes CLIC1 and RGS5 have been found to help the rapid, uncontrolled growth of cancer cells. HSD11B2, IRAK1, and COL1Al have been found to contribute to general cancer characteristics and metastasis in breast cancer. PSMA7 has been found to play a role in androgen receptor activation. Finally, SIDT1 and GLYATL1 are both associated with breast and prostate cancers. Overall, through the analysis of differential isoform usage between AR+ and AR- samples, we uncovered differences that were not detected by a gene level differential expression analysis. Thus, future work will focus on analyzing differential gene and isoform expression across all types of breast cancer and prostate cancer to better understand the responsiveness of TNBC to androgen receptor inhibition.
ContributorsDeshpande, Anagha J (Author) / Wilson-Sayres, Melissa (Thesis director) / Buetow, Kenneth (Committee member) / Natri, Heini (Committee member) / School of Human Evolution & Social Change (Contributor) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
In recent years, the Maine lobster industry, researchers, and policy makers have attempted to come together to set new regulations into place that will help slow the decline of right whale populations off the North Atlantic coast. Like many species, right whales were once abundant in the Atlantic before commercial whaling practices decimated populations to near extinction by the 1900’s (Fujiwara et al., 2001). Today’s populations total to approximately 450 individuals worldwide and continue to decline despite conservation efforts (Pace et al., 2017). Though commercial whaling no longer poses a threat to right whales, there are other factors that have proven to be detrimental to their survival. In particular, ship strikes and entanglement in fishing rope are the main causes for continued population decline (Knowlton et al., 2012).
One may ask, how is all of this connected specifically to the Maine lobster industry? It has been determined that approximately 80% of right whales currently have scars along their bodies as a result of being entangled in fishing rope. More specifically, the rope that right whales are becoming entangled in is the vertical line used by lobstermen that connects the lobster trap lying on the seafloor to a buoy at the surface. Not only can this entanglement lead to the drowning of individuals, but also a decreased birth rate among females due to stress should they successfully free themselves (Knowlton et al., 2012).
In an attempt to decrease entanglement rates and bring the decline in right whale populations to a halt, the state of Maine has been in the process of creating and implementing new policies, many of which will have an impact on the lobster industry. Regulations that have been considered include weakened vertical lines, modified gear marking, a change in rope color, reduction in traps, or even the introduction of new ropeless technology.
What perceptions do lobstermen in Maine have regarding the conservation of right whales and the possible regulations that could be put into place? To address this question, I posted a Google Forms survey link on a local Maine fishermen’s Facebook page in late December 2018 that remained open until the end of February 2019. The five-minute survey was to be completed on a voluntary basis to gather a convenient sample from the 15,000 members on the group page, of which not all were lobstermen. There was a total of 39 participants. The survey asked about opinions regarding a series of possible regulations that could possibly impact the lobster industry, should they be implemented. Additionally, the survey provided space for lobstermen to explain how past regulations had impacted them personally, as well as space for recommendations they thought would help conserve right whale populations while simultaneously creating little negative impact on the lobster industry.
One may ask, how is all of this connected specifically to the Maine lobster industry? It has been determined that approximately 80% of right whales currently have scars along their bodies as a result of being entangled in fishing rope. More specifically, the rope that right whales are becoming entangled in is the vertical line used by lobstermen that connects the lobster trap lying on the seafloor to a buoy at the surface. Not only can this entanglement lead to the drowning of individuals, but also a decreased birth rate among females due to stress should they successfully free themselves (Knowlton et al., 2012).
In an attempt to decrease entanglement rates and bring the decline in right whale populations to a halt, the state of Maine has been in the process of creating and implementing new policies, many of which will have an impact on the lobster industry. Regulations that have been considered include weakened vertical lines, modified gear marking, a change in rope color, reduction in traps, or even the introduction of new ropeless technology.
What perceptions do lobstermen in Maine have regarding the conservation of right whales and the possible regulations that could be put into place? To address this question, I posted a Google Forms survey link on a local Maine fishermen’s Facebook page in late December 2018 that remained open until the end of February 2019. The five-minute survey was to be completed on a voluntary basis to gather a convenient sample from the 15,000 members on the group page, of which not all were lobstermen. There was a total of 39 participants. The survey asked about opinions regarding a series of possible regulations that could possibly impact the lobster industry, should they be implemented. Additionally, the survey provided space for lobstermen to explain how past regulations had impacted them personally, as well as space for recommendations they thought would help conserve right whale populations while simultaneously creating little negative impact on the lobster industry.
ContributorsBolduc, Madison Creed (Author) / Gerber, Leah (Thesis director) / Jenkins, Lekelia (Committee member) / Bernard, Miranda (Committee member) / School of Life Sciences (Contributor) / School of Sustainability (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
Lower termites are classified as termites that require a symbiotic relationship with their hindgut community of single-celled protozoa in order to gather nutrients to survive. The class Spirotrichonymphea is one of the six classes of protists that make up the Phylum Parabasalia. Within the class Spirotrichonymphea, there are 3 families and 11 genera. In this study, the Spirotrichonympha, Spironympha, and Microjoenia genera (family Spirotrichonymphidae), Holomastigotes genus (family Holomastigotidae), along with a new genus Brugerollea were targeted for molecular analysis. Protist cells were collected from Reticulitermes tibialis (Rhinotermitidae), Hodotermopsis sjostedti (Archotermopsidae), and Paraneotermes simplicornis (Kalotermidiae). Most molecular phylogenetic studies of termite-associated protists have used the 18S rRNA gene, however, there have been some ambiguities in the phylogeny of this gene. EF1-α, also known as EF1A, is a protein whose sequence can additionally be used to study the evolution of protists. EF1-α gene sequences were obtained from isolated protist cells by reverse transcription PCR (RT-PCR). Additionally, the 18S rRNA gene was amplified to confirm the isolated cells’ identity and compare the two phylogenetic methods, to see which would better resolve phylogenetic ambiguities. Sequences were compiled into an alignment for each target gene, and then a maximum likelihood tree was created for each using RAxML. Results from both trees supports the monophyly of Spirotrichonymphea and the polyphyly of genus Spirotrichonympha. However, neither gene fully resolves the phylogeny of Spirotrichonymphea.
ContributorsNguyen, Keana (Author) / Gile, Gillian (Thesis director) / De Martini, Francesca (Committee member) / Taerum, Stephen Joshua (Committee member) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
In the study of the human brain’s ability to multitask, there are two perspectives: concurrent multitasking (performing multiple tasks simultaneously) and sequential multitasking (switching between tasks). The goal of this study is to investigate the human brain’s ability to “multitask” with multiple demanding stimuli of approximately equal concentration, from an electrophysiological perspective different than that of stimuli which don’t require full attention or exhibit impulsive multitasking responses. This study investigates the P3 component which has been experimentally proven to be associated with mental workload through information processing and cognitive function in visual and auditory tasks, where in the multitasking domain the greater attention elicited, the larger P3 waves are produced. This experiment compares the amplitude of the P3 component of individual stimulus presentation to that of multitasking trials, taking note of the brain workload. This study questions if the average wave amplitude in a multitasking ERP experiment will be the same as the grand average when performing the two tasks individually with respect to the P3 component. The hypothesis is that the P3 amplitude will be smaller in the multitasking trial than in the individual stimulus presentation, indicating that the brain is not actually concentrating on both tasks at once (sequential multitasking instead of concurrent) and that the brain is not focusing on each stimulus to the same degree when it was presented individually. Twenty undergraduate students at Barrett, the Honors College at Arizona State University (10 males and 10 females, with a mean age of 18.75 years, SD= 1.517) right handed, with normal or corrected visual acuity, English as first language, and no evidence of neurological compromise participated in the study. The experiment results revealed that one- hundred percent of participants undergo sequential multitasking in the presence of two demanding stimuli in the electrophysiological data, behavioral data, and subjective data. In this particular study, these findings indicate that the presence of additional demanding stimuli causes the workload of the brain to decrease as attention deviates in a bottleneck process to the multiple requisitions for focus, indicated by a reduced P3 voltage amplitude with the multitasking stimuli when compared to the independent. This study illustrates the feasible replication of P3 cognitive workload results for demanding stimuli, not only impulsive-response experiments, to suggest the brain’s tendency to undergo sequential multitasking when faced with multiple demanding stimuli. In brief, this study demonstrates that when higher cognitive processing is required to interpret and respond to the stimuli, the human brain results to sequential multitasking (task- switching, not concurrent multitasking) in the face of more challenging problems with each stimulus requiring a higher level of focus, workload, and attention.
ContributorsNeill, Ryan (Author) / Brewer, Gene (Thesis director) / Peter, Beate (Committee member) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05