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At present, the vast majority of human subjects with neurological disease are still diagnosed through in-person assessments and qualitative analysis of patient data. In this paper, we propose to use Topological Data Analysis (TDA) together with machine learning tools to automate the process of Parkinson’s disease classification and severity assessment.

At present, the vast majority of human subjects with neurological disease are still diagnosed through in-person assessments and qualitative analysis of patient data. In this paper, we propose to use Topological Data Analysis (TDA) together with machine learning tools to automate the process of Parkinson’s disease classification and severity assessment. An automated, stable, and accurate method to evaluate Parkinson’s would be significant in streamlining diagnoses of patients and providing families more time for corrective measures. We propose a methodology which incorporates TDA into analyzing Parkinson’s disease postural shifts data through the representation of persistence images. Studying the topology of a system has proven to be invariant to small changes in data and has been shown to perform well in discrimination tasks. The contributions of the paper are twofold. We propose a method to 1) classify healthy patients from those afflicted by disease and 2) diagnose the severity of disease. We explore the use of the proposed method in an application involving a Parkinson’s disease dataset comprised of healthy-elderly, healthy-young and Parkinson’s disease patients.
ContributorsRahman, Farhan Nadir (Co-author) / Nawar, Afra (Co-author) / Turaga, Pavan (Thesis director) / Krishnamurthi, Narayanan (Committee member) / Electrical Engineering Program (Contributor) / Computer Science and Engineering Program (Contributor) / Barrett, The Honors College (Contributor)
Created2020-05
Description
Video summarization is gaining popularity in the technological culture, where positioning the mouse pointer on top of a video results in a quick overview of what the video is about. The algorithm usually selects frames in a time sequence through systematic sampling. Invariably, there are other applications like video surveillance,

Video summarization is gaining popularity in the technological culture, where positioning the mouse pointer on top of a video results in a quick overview of what the video is about. The algorithm usually selects frames in a time sequence through systematic sampling. Invariably, there are other applications like video surveillance, web-based video surfing and video archival applications which can benefit from efficient and concise video summaries. In this project, we explored several clustering algorithms and how these can be combined and deconstructed to make summarization algorithm more efficient and relevant. We focused on two metrics to summarize: reducing error and redundancy in the summary. To reduce the error online k-means clustering algorithm was used; to reduce redundancy we applied two different methods: volume of convex hulls and the true diversity measure that is usually used in biological disciplines. The algorithm was efficient and computationally cost effective due to its online nature. The diversity maximization (or redundancy reduction) using technique of volume of convex hulls showed better results compared to other conventional methods on 50 different videos. For the true diversity measure, there has not been much work done on the nature of the measure in the context of video summarization. When we applied it, the algorithm stalled due to the true diversity saturating because of the inherent initialization present in the algorithm. We explored the nature of this measure to gain better understanding on how it can help to make summarization more intuitive and give the user a handle to customize the summary.
ContributorsMasroor, Ahnaf (Co-author) / Anirudh, Rushil (Co-author) / Turaga, Pavan (Thesis director) / Spanias, Andreas (Committee member) / School of Mathematical and Statistical Sciences (Contributor) / Electrical Engineering Program (Contributor) / Barrett, The Honors College (Contributor)
Created2017-05
Description

Human activity recognition is the task of identifying a person’s movement from sensors in a wearable device, such as a smartphone, smartwatch, or a medical-grade device. A great method for this task is machine learning, which is the study of algorithms that learn and improve on their own with

Human activity recognition is the task of identifying a person’s movement from sensors in a wearable device, such as a smartphone, smartwatch, or a medical-grade device. A great method for this task is machine learning, which is the study of algorithms that learn and improve on their own with the help of massive amounts of useful data. These classification models can accurately classify activities with the time-series data from accelerometers and gyroscopes. A significant way to improve the accuracy of these machine learning models is preprocessing the data, essentially augmenting data to make the identification of each activity, or class, easier for the model. <br/>On this topic, this paper explains the design of SigNorm, a new web application which lets users conveniently transform time-series data and view the effects of those transformations in a code-free, browser-based user interface. The second and final section explains my take on a human activity recognition problem, which involves comparing a preprocessed dataset to an un-augmented one, and comparing the differences in accuracy using a one-dimensional convolutional neural network to make classifications.

ContributorsLi, Vincent (Author) / Turaga, Pavan (Thesis director) / Buman, Matthew (Committee member) / Computer Science and Engineering Program (Contributor) / Barrett, The Honors College (Contributor)
Created2021-05
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Description

Classification in machine learning is quite crucial to solve many problems that the world is presented with today. Therefore, it is key to understand one’s problem and develop an efficient model to achieve a solution. One technique to achieve greater model selection and thus further ease in problem solving is

Classification in machine learning is quite crucial to solve many problems that the world is presented with today. Therefore, it is key to understand one’s problem and develop an efficient model to achieve a solution. One technique to achieve greater model selection and thus further ease in problem solving is estimation of the Bayes Error Rate. This paper provides the development and analysis of two methods used to estimate the Bayes Error Rate on a given set of data to evaluate performance. The first method takes a “global” approach, looking at the data as a whole, and the second is more “local”—partitioning the data at the outset and then building up to a Bayes Error Estimation of the whole. It is found that one of the methods provides an accurate estimation of the true Bayes Error Rate when the dataset is at high dimension, while the other method provides accurate estimation at large sample size. This second conclusion, in particular, can have significant ramifications on “big data” problems, as one would be able to clarify the distribution with an accurate estimation of the Bayes Error Rate by using this method.

ContributorsLattus, Robert (Author) / Dasarathy, Gautam (Thesis director) / Berisha, Visar (Committee member) / Turaga, Pavan (Committee member) / Barrett, The Honors College (Contributor) / Electrical Engineering Program (Contributor)
Created2021-12
Description

In this thesis, I explored the interconnected ways in which human experience can shape and be shaped by environments of the future, such as interactive environments and spaces, embedded with sensors, enlivened by advanced algorithms for sensor data processing. I have developed an abstract representational experience into the vast and

In this thesis, I explored the interconnected ways in which human experience can shape and be shaped by environments of the future, such as interactive environments and spaces, embedded with sensors, enlivened by advanced algorithms for sensor data processing. I have developed an abstract representational experience into the vast and continual journey through life that shapes how we can use sensory immersion. The experimental work was housed in the iStage: an advanced black box space in the School of Arts, Media, and Engineering, which consists of video cameras, motion capture systems, spatial audio systems, and controllable lighting and projector systems. The malleable and interactive space of the iStage transformed into a reflective tool in which to gain insight into the overall shared, but very individual, emotional odyssey. Additionally, I surveyed participants after engaging in the experience to better understand their perceptions and interpretations of the experience. With the responses of participants' experiences and collective reflection upon the project I can begin to think about future iterations and how they might contain applications in health and/or wellness.

ContributorsHaagen, Jordan (Author) / Turaga, Pavan (Thesis director) / Drummond Otten, Caitlin (Committee member) / Barrett, The Honors College (Contributor) / Arts, Media and Engineering Sch T (Contributor) / School of Human Evolution & Social Change (Contributor)
Created2022-05
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ContributorsHaagen, Jordan (Author) / Turaga, Pavan (Thesis director) / Drummond Otten, Caitlin (Committee member) / Barrett, The Honors College (Contributor) / Arts, Media and Engineering Sch T (Contributor)
Created2022-05
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ContributorsHaagen, Jordan (Author) / Turaga, Pavan (Thesis director) / Drummond Otten, Caitlin (Committee member) / Barrett, The Honors College (Contributor) / Arts, Media and Engineering Sch T (Contributor)
Created2022-05
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Description
Oftentimes, patients struggle to accurately describe their symptoms to medical professionals, which produces erroneous diagnoses, delaying and preventing treatment. My app, Augnosis, will streamline constructive communication between patient and doctor, and allow for more accurate diagnoses. The goal of this project was to create an app capable of gathering data

Oftentimes, patients struggle to accurately describe their symptoms to medical professionals, which produces erroneous diagnoses, delaying and preventing treatment. My app, Augnosis, will streamline constructive communication between patient and doctor, and allow for more accurate diagnoses. The goal of this project was to create an app capable of gathering data on visual symptoms of facial acne and categorizing it to differentiate between diagnoses using image recognition and identification. “Augnosis”, is a combination of the words “Augmented Reality” and “Self-Diagnosis”, the former being the medium in which it is immersed and the latter detailing its functionality.
ContributorsGoyal, Nandika (Author) / Johnson, Mina (Thesis director) / Bryan, Chris (Committee member) / Turaga, Pavan (Committee member) / Barrett, The Honors College (Contributor) / Computer Science and Engineering Program (Contributor)
Created2022-05