Matching Items (4)
Filtering by
- All Subjects: Molecules
- All Subjects: Separations
- Creators: Buttry, Daniel
Description
Metal-organic frameworks (MOFs) are a new set of porous materials comprised of metals or metal clusters bonded together in a coordination system by organic linkers. They are becoming popular for gas separations due to their abilities to be tailored toward specific applications. Zirconium MOFs in particular are known for their high stability under standard temperature and pressure due to the strength of the Zirconium-Oxygen coordination bond. However, the acid modulator needed to ensure long range order of the product also prevents complete linker deprotonation. This leads to a powder product that cannot easily be incorporated into continuous MOF membranes. This study therefore implemented a new bi-phase synthesis technique with a deprotonating agent to achieve intergrowth in UiO-66 membranes. Crystal intergrowth will allow for effective gas separations and future permeation testing. During experimentation, successful intergrown UiO-66 membranes were synthesized and characterized. The degree of intergrowth and crystal orientations varied with changing deprotonating agent concentration, modulator concentration, and ligand:modulator ratios. Further studies will focus on achieving the same results on porous substrates.
ContributorsClose, Emily Charlotte (Author) / Mu, Bin (Thesis director) / Shan, Bohan (Committee member) / Chemical Engineering Program (Contributor) / Barrett, The Honors College (Contributor)
Created2016-12
Description
X-ray crystallography is the most widely used method to determine the structure of proteins, providing an understanding of their functions in all aspects of life to advance applications in fields such as drug development and renewable energy. New techniques, namely serial femtosecond crystallography (SFX), have unlocked the ability to unravel the structures of complex proteins with vital biological functions. A key step and major bottleneck of structure determination is protein crystallization, which is very arduous due to the complexity of proteins and their natural environments. Furthermore, crystal characteristics govern data quality, thus need to be optimized to attain the most accurate reconstruction of the protein structure. Crystal size is one such characteristic in which narrowed distributions with a small modal size can significantly reduce the amount of protein needed for SFX. A novel microfluidic sorting platform was developed to isolate viable ~200 nm – ~600 nm photosystem I (PSI) membrane protein crystals from ~200 nm – ~20 μm crystal samples using dielectrophoresis, as confirmed by fluorescence microscopy, second-order nonlinear imaging of chiral crystals (SONICC), and dynamic light scattering. The platform was scaled-up to rapidly provide 100s of microliters of sorted crystals necessary for SFX, in which similar crystal size distributions were attained. Transmission electron microscopy was used to view the PSI crystal lattice, which remained well-ordered postsorting, and SFX diffraction data was obtained, confirming a high-quality, viable crystal sample. Simulations indicated sorted samples provided accurate, complete SFX datasets with 3500-fold less protein than unsorted samples. Microfluidic devices were also developed for versatile, rapid protein crystallization screening using nanovolumes of sample. Concentration gradients of protein and precipitant were generated to crystallize PSI, phycocyanin, and lysozyme using modified counterdiffusion. Additionally, a passive mixer was created to generate unique solution concentrations within isolated nanowells to crystallize phycocyanin and lysozyme. Crystal imaging with brightfield microscopy, UV fluorescence, and SONICC coupled with numerical modeling allowed quantification of crystal growth conditions for efficient phase diagram development. The developed microfluidic tools demonstrated the capability of improving samples for protein crystallography, offering a foundation for continued development of platforms to aid protein structure determination.
ContributorsAbdallah, Bahige G (Author) / Ros, Alexandra (Thesis advisor) / Buttry, Daniel (Committee member) / Hayes, Mark (Committee member) / Arizona State University (Publisher)
Created2016
Description
Over the last few decades, homogeneous molybdenum catalysis has been a center of interest to inorganic, organic, and organometallic chemists. Interestingly, most of the important advancements in molybdenum chemistry such as non-classical dihydrogen coordination, dinitrogen reduction, olefin metathesis, and water reduction utilize diverse oxidation states of the metal. However, employment of redox non-innocent ligands to tune the stability and reactivity of such catalysts have been overlooked. With this in mind, the Trovitch group has developed a series of novel bis(imino)pyridine (or pyridine diimine, PDI) and diimine (DI) ligands that have coordinating phosphine or amine arms to exert coordination flexibility to the designed complexes. The research described in this dissertation is focused on the development of molybdenum catalysts that are supported by PDI and DI chelates and their application in small molecule activation.
Using the phosphine containing PDI chelate, Ph2PPrPDI, several low-valent molybdenum complexes have been synthesized and characterized. While the zerovalent monocarbonyl complex, (Ph2PPrPDI)MoCO, catalyzes the reduction of aldehyde C=O bonds, the C-H activated Mo(II) complex, (6-P,N,N,N,C,P-Ph2PPrPDI)MoH was found to be the first well-defined molybdenum catalyst for reducing carbon dioxide to methanol. Along with low- oxidation state compounds, a Mo(IV) complex, [(Ph2PPrPDI)MoO][PF6]2 was also synthesized and utilized in electrocatalytic hydrogen production from neutral water. Moreover, with the proper choice of reductant, an uncommon Mo(I) oxidation state was stabilized and characterized by electron paramagnetic resonance spectroscopy and single crystal X-ray diffraction.
While the synthesized (PDI)Mo complexes unveiled versatile reduction chemistry, varying the ligand backbone to DI uncovered completely different reactivity when bound to molybdenum. Unlike PDI, no chelate-arm C-H activation was observed with the propyl phosphine DI, Ph2PPrDI; instead, a bis(dinitrogen) Mo(0) complex, (Ph2PPrDI)Mo(N2)2 was isolated. Surprisingly, this complex was found to convert carbon dioxide into dioxygen and carbon monoxide under ambient conditions through a novel tail-to-tail CO2 reductive coupling pathway. Detailed experimental and theoretical studies are underway to gain further information about the possible mechanism of Mo mediated direct conversion of CO2 to O2.
Using the phosphine containing PDI chelate, Ph2PPrPDI, several low-valent molybdenum complexes have been synthesized and characterized. While the zerovalent monocarbonyl complex, (Ph2PPrPDI)MoCO, catalyzes the reduction of aldehyde C=O bonds, the C-H activated Mo(II) complex, (6-P,N,N,N,C,P-Ph2PPrPDI)MoH was found to be the first well-defined molybdenum catalyst for reducing carbon dioxide to methanol. Along with low- oxidation state compounds, a Mo(IV) complex, [(Ph2PPrPDI)MoO][PF6]2 was also synthesized and utilized in electrocatalytic hydrogen production from neutral water. Moreover, with the proper choice of reductant, an uncommon Mo(I) oxidation state was stabilized and characterized by electron paramagnetic resonance spectroscopy and single crystal X-ray diffraction.
While the synthesized (PDI)Mo complexes unveiled versatile reduction chemistry, varying the ligand backbone to DI uncovered completely different reactivity when bound to molybdenum. Unlike PDI, no chelate-arm C-H activation was observed with the propyl phosphine DI, Ph2PPrDI; instead, a bis(dinitrogen) Mo(0) complex, (Ph2PPrDI)Mo(N2)2 was isolated. Surprisingly, this complex was found to convert carbon dioxide into dioxygen and carbon monoxide under ambient conditions through a novel tail-to-tail CO2 reductive coupling pathway. Detailed experimental and theoretical studies are underway to gain further information about the possible mechanism of Mo mediated direct conversion of CO2 to O2.
ContributorsPal, Raja (Author) / Trovitch, Ryan J (Thesis advisor) / Buttry, Daniel (Committee member) / Seo, Don (Committee member) / Arizona State University (Publisher)
Created2016
Description
Studying charge transport through single molecules is of great importance for unravelling charge transport mechanisms, investigating fundamentals of chemistry, and developing functional building blocks in molecular electronics.
First, a study of the thermoelectric effect in single DNA molecules is reported. By varying the molecular length and sequence, the charge transport in DNA was tuned to either a hopping- or tunneling-dominated regimes. In the hopping regime, the thermoelectric effect is small and insensitive to the molecular length. Meanwhile, in the tunneling regime, the thermoelectric effect is large and sensitive to the length. These findings indicate that by varying its sequence and length, the thermoelectric effect in DNA can be controlled. The experimental results are then described in terms of hopping and tunneling charge transport models.
Then, I showed that the electron transfer reaction of a single ferrocene molecule can be controlled with a mechanical force. I monitor the redox state of the molecule from its characteristic conductance, detect the switching events of the molecule from reduced to oxidized states with the force, and determine a negative shift of ~34 mV in the redox potential under force. The theoretical modeling is in good agreement with the observations, and reveals the role of the coupling between the electronic states and structure of the molecule.
Finally, conclusions and perspectives were discussed to point out the implications of the above works and future studies that can be performed based on the findings.
First, a study of the thermoelectric effect in single DNA molecules is reported. By varying the molecular length and sequence, the charge transport in DNA was tuned to either a hopping- or tunneling-dominated regimes. In the hopping regime, the thermoelectric effect is small and insensitive to the molecular length. Meanwhile, in the tunneling regime, the thermoelectric effect is large and sensitive to the length. These findings indicate that by varying its sequence and length, the thermoelectric effect in DNA can be controlled. The experimental results are then described in terms of hopping and tunneling charge transport models.
Then, I showed that the electron transfer reaction of a single ferrocene molecule can be controlled with a mechanical force. I monitor the redox state of the molecule from its characteristic conductance, detect the switching events of the molecule from reduced to oxidized states with the force, and determine a negative shift of ~34 mV in the redox potential under force. The theoretical modeling is in good agreement with the observations, and reveals the role of the coupling between the electronic states and structure of the molecule.
Finally, conclusions and perspectives were discussed to point out the implications of the above works and future studies that can be performed based on the findings.
ContributorsLi, Yueqi, Ph.D (Author) / Tao, Nongjian (Thesis advisor) / Buttry, Daniel (Committee member) / Mujica, Vladimiro (Committee member) / Arizona State University (Publisher)
Created2017