Matching Items (21)
Description
The late first row transition metals, being inexpensive and environmentally benign, have become very attractive for sustainable catalyst development. However, to overcome the detrimental one electron redox processes exhibited by these metals, the employment of redox non-innocent chelates turned out to be very useful. The Trovitch group has designed a series of pentadentate bis(imino)pyridine ligands (pyridine diimine, PDI) that are capable of binding the metal center beyond their 3-N,N,N core and also possess coordination flexibility. My research is focused on developing PDI-supported manganese catalysts for organic transformations and renewable fuel production.
The thesis presents synthesis and characterization of a family of low valent (PDI)Mn complexes. Detailed electronic structure evaluation from spectroscopic and crystallographic data revealed electron transfer from the reduced metal center to the accessible ligand orbitals. One particular (PDI)Mn variant, (5-Ph2PPrPDI)Mn has been found to be the most efficient carbonyl hydrosilylation catalyst reported till date, achieving a maximum turnover frequency of up to 4950 min-1. This observation demanded a thorough investigation of the operative mechanism. A series of controlled stoichiometric reactions, detailed kinetic analysis, and relevant intermediate isolation suggest a mechanism that involves oxidative addition, carbonyl insertion, and reductive elimination. Noticing such remarkable efficiency of the (PDI)Mn system, it has been tested for application in renewable fuel generation. A modest efficiency for H2 production at an apparent pH of 8.4 have been achieved using a cationic Mn complex, [(Ph2PPrPDI)Mn(CO)]Br. Although, a detailed mechanistic investigation remained challenging due to complex instability, a set of relevant Mn(-I) intermediates have been isolated and characterized thoroughly.
The dissertation also includes synthesis, characterization, and electronic structure evaluation of a series of Triphos supported iron complexes. Using this pincer chelate and either 2,2’-bipyridine (bpy) or 1,3,5,7-cyclooctatetraene (COT), a set of electronically interesting complexes have been isolated. Detailed electronic structure investigation using spectroscopy, magnetometry, crystallography, and DFT calculations revealed redox non-innocent behavior in the Bpy and COT ligands. Additionally, CO binding to the (Triphos)Fe system followed by reaction with borohydride reagents allowed for the isolation of some catalytically relevant and reactive iron hydride complexes.
The thesis presents synthesis and characterization of a family of low valent (PDI)Mn complexes. Detailed electronic structure evaluation from spectroscopic and crystallographic data revealed electron transfer from the reduced metal center to the accessible ligand orbitals. One particular (PDI)Mn variant, (5-Ph2PPrPDI)Mn has been found to be the most efficient carbonyl hydrosilylation catalyst reported till date, achieving a maximum turnover frequency of up to 4950 min-1. This observation demanded a thorough investigation of the operative mechanism. A series of controlled stoichiometric reactions, detailed kinetic analysis, and relevant intermediate isolation suggest a mechanism that involves oxidative addition, carbonyl insertion, and reductive elimination. Noticing such remarkable efficiency of the (PDI)Mn system, it has been tested for application in renewable fuel generation. A modest efficiency for H2 production at an apparent pH of 8.4 have been achieved using a cationic Mn complex, [(Ph2PPrPDI)Mn(CO)]Br. Although, a detailed mechanistic investigation remained challenging due to complex instability, a set of relevant Mn(-I) intermediates have been isolated and characterized thoroughly.
The dissertation also includes synthesis, characterization, and electronic structure evaluation of a series of Triphos supported iron complexes. Using this pincer chelate and either 2,2’-bipyridine (bpy) or 1,3,5,7-cyclooctatetraene (COT), a set of electronically interesting complexes have been isolated. Detailed electronic structure investigation using spectroscopy, magnetometry, crystallography, and DFT calculations revealed redox non-innocent behavior in the Bpy and COT ligands. Additionally, CO binding to the (Triphos)Fe system followed by reaction with borohydride reagents allowed for the isolation of some catalytically relevant and reactive iron hydride complexes.
ContributorsMukhopadhyay, Tufan K (Author) / Trovitch, Ryan J (Thesis advisor) / Buttry, Daniel (Committee member) / Pettit, George (Committee member) / Arizona State University (Publisher)
Created2016
Description
Operando transmission electron microscopy (TEM) is an extension of in-situ TEM in which the performance of the material being observed is measured simultaneously. This is of great value, since structure-performance relationships lie at the heart of materials science. For catalyst materials, like the SiO2-supported Ru nanoparticles studied, the important performance metric, catalyst activity, is measured inside the microscope by determining the gas composition during imaging. This is accomplished by acquisition of electron energy loss spectra (EELS) of the gas in the environmental TEM while catalysis is taking place. In this work, automated methods for rapidly quantifying low-loss and core-loss EELS of gases were developed. A new sample preparation method was also established to increase catalytic conversion inside a differentially-pumped environmental TEM, and the maximum CO conversion observed was about 80%. A system for mixing gases and delivering them to the environmental TEM was designed and built, and a method for locating and imaging nanoparticles in zone axis orientations while minimizing electron dose rate was determined.
After atomic resolution images of Ru nanoparticles observed during CO oxidation were obtained, the shape and surface structures of these particles was investigated. A Wulff model structure for Ru particles was compared to experimental images both by manually rotating the model, and by automatically determining a matching orientation using cross-correlation of shape signatures. From this analysis, it was determined that most Ru particles are close to Wulff-shaped during CO oxidation. While thick oxide layers were not observed to form on Ru during CO oxidation, thin RuO2 layers on the surface of Ru nanoparticles were imaged with atomic resolution for the first time. The activity of these layers is discussed in the context of the literature on the subject, which has thus far been inconclusive. We conclude that disordered oxidized ruthenium, rather than crystalline RuO2 is the most active species.
After atomic resolution images of Ru nanoparticles observed during CO oxidation were obtained, the shape and surface structures of these particles was investigated. A Wulff model structure for Ru particles was compared to experimental images both by manually rotating the model, and by automatically determining a matching orientation using cross-correlation of shape signatures. From this analysis, it was determined that most Ru particles are close to Wulff-shaped during CO oxidation. While thick oxide layers were not observed to form on Ru during CO oxidation, thin RuO2 layers on the surface of Ru nanoparticles were imaged with atomic resolution for the first time. The activity of these layers is discussed in the context of the literature on the subject, which has thus far been inconclusive. We conclude that disordered oxidized ruthenium, rather than crystalline RuO2 is the most active species.
ContributorsMiller, Benjamin (Author) / Crozier, Peter (Thesis advisor) / Liu, Jingyue (Committee member) / McCartney, Martha (Committee member) / Rez, Peter (Committee member) / Arizona State University (Publisher)
Created2016
Description
New sol-gel routes were developed to fabricate transparent conducting oxide coatings for energy applications. Sol-gel synthesis was chosen because the metal oxide products have high surface area and porosity. Titanium sol-gel chemistry was the main focus of the studies, and the synthesis of macroporous antimony-doped tin oxide was also explored. The surface chemistry and band characteristics of anatase TiO2 show promise for solar energy purposes as photoelectrodes in DSSCs and as photocatalysts to degrade organic dyes and to split water. Modifying the band structure by increasing the conduction band edge energy is specifically of interest for reducing protons in water. To this end, a new sol-gel method was developed for incorporating Zr-dopant in nanoporous anatase TiO2. The products follow Vegard’s law up to 20 atom%, exhibiting surface area of 79 m2/g and pore volume of 0.20 cm3/g with average pore diameter of 10.3 nm; the conduction band edge energy increased by 0.22 eV and the band gap increased by 0.1 eV.
In pursuit of a greener sol-gel route for TiO2 materials, a solution of TiOSO4 in water was explored. Success in obtaining a gel came by utilizing hydrogen peroxide as a ligand that suppressed precipitation reactions. Through modifying this sol-gel chemistry to obtain a solid acid, the new material hydrogen titanium phosphate sulfate, H1-xTi2(PO4)3-x(SO4)x, (0 < x < 0.5) was synthesized and characterized for the first time. From the reported synthetic route, this compound took the form of macroscopic agglomerates of nanoporous aggregates of nanoparticles around 20 nm and the product calcined at 600 °C exhibited surface area of 78 m2/g, pore volume of 0.22 cm3/g and an average pore width of 11 nm. This solid acid exhibits complete selectivity for the non-oxidative dehydrogenation of methanol to formaldehyde and hydrogen gas, with >50% conversion at 300 °C.
Finally, hierarchically meso-macroporous antimony doped tin oxide was synthesized with regular macropore size around 210 nm, determined by statistical dye trajectory tracking, and also with larger pores up to micrometers in size. The structure consisted of nanoparticles around 4 nm in size, with textural mesopores around 20 nm in diameter.
In pursuit of a greener sol-gel route for TiO2 materials, a solution of TiOSO4 in water was explored. Success in obtaining a gel came by utilizing hydrogen peroxide as a ligand that suppressed precipitation reactions. Through modifying this sol-gel chemistry to obtain a solid acid, the new material hydrogen titanium phosphate sulfate, H1-xTi2(PO4)3-x(SO4)x, (0 < x < 0.5) was synthesized and characterized for the first time. From the reported synthetic route, this compound took the form of macroscopic agglomerates of nanoporous aggregates of nanoparticles around 20 nm and the product calcined at 600 °C exhibited surface area of 78 m2/g, pore volume of 0.22 cm3/g and an average pore width of 11 nm. This solid acid exhibits complete selectivity for the non-oxidative dehydrogenation of methanol to formaldehyde and hydrogen gas, with >50% conversion at 300 °C.
Finally, hierarchically meso-macroporous antimony doped tin oxide was synthesized with regular macropore size around 210 nm, determined by statistical dye trajectory tracking, and also with larger pores up to micrometers in size. The structure consisted of nanoparticles around 4 nm in size, with textural mesopores around 20 nm in diameter.
ContributorsMieritz, Daniel (Author) / Seo, Dong-Kyun (Thesis advisor) / Petuskey, William (Committee member) / Herckes, Pierre (Committee member) / Arizona State University (Publisher)
Created2016
Description
Development of efficient and renewable electrocatalytic systems is foundational to creation of effective means to produce solar fuels. Many redox enzymes are functional electrocatalysts when immobilized on an electrode, but long-term stability of isolated proteins limits use in applications. Thus there is interest in developing bio-inspired functional catalysts or electrocatalytic systems based on living organisms. This dissertation describes efforts to create both synthetic and biological electrochemical systems for electrocatalytic hydrogen production.
The first part of this dissertation describes the preparation of three different types of proton reduction catalysts. First, four bioinspired diiron complexes of the form (μ-SRS)Fe(CO)3[Fe(CO)(N-N)] for SRS = 1,2-benzenedithiolate (bdt) and 1,3-propanedithiolate (pdt) and N-N = 2,2’-bipyridine (bpy) and 2,2’-bypyrimidine (bpym), are described. Electrocatatlytic experiments show that although the byprimidinal complexes are not catalysts, the bipyridyl complexes produce hydrogen from acetic acid under reducing conditions. Second, three new mononuclear FeII carbonyl complexes of the form [Fe(CO)(bdt)(PPh2)2] in which P2 = bis-phosphine: 4,5-Bis(diphenylphosphino)- 9,9-dimethylxanthene (Xantphos), 1,2-Bis(diphenylphosphino)benzene (dppb), or cis- 1,2-Bis(diphenylphosphino)ethylene (dppv) are described. All are functional bio-inspired models of the distal Fe site of [FeFe]-hydrogenases. Of these, the Xanthphos complex is the most stable to redox reactions and active as an electrocatalyst. Third, a molybdenum catalyst based on the redox non-innocent PDI ligand framework is also shown to produce hydrogen in the presence of acid.
The second part of this dissertation describes creating functional interfaces between chemical and biological models at electrode surfaces to create electroactive systems. First, covalent tethering of the redox probe ferrocene to thiol-functionalized reduced graphene oxide is demonstrated. I demonstrate that this attachment is via the thiol functional groups. Second, I demonstrate the ability to use electricity in combination with light to drive production of hydrogen by the anaerobic, phototrophic microorganism Heliobacterium modesticaldum.
The first part of this dissertation describes the preparation of three different types of proton reduction catalysts. First, four bioinspired diiron complexes of the form (μ-SRS)Fe(CO)3[Fe(CO)(N-N)] for SRS = 1,2-benzenedithiolate (bdt) and 1,3-propanedithiolate (pdt) and N-N = 2,2’-bipyridine (bpy) and 2,2’-bypyrimidine (bpym), are described. Electrocatatlytic experiments show that although the byprimidinal complexes are not catalysts, the bipyridyl complexes produce hydrogen from acetic acid under reducing conditions. Second, three new mononuclear FeII carbonyl complexes of the form [Fe(CO)(bdt)(PPh2)2] in which P2 = bis-phosphine: 4,5-Bis(diphenylphosphino)- 9,9-dimethylxanthene (Xantphos), 1,2-Bis(diphenylphosphino)benzene (dppb), or cis- 1,2-Bis(diphenylphosphino)ethylene (dppv) are described. All are functional bio-inspired models of the distal Fe site of [FeFe]-hydrogenases. Of these, the Xanthphos complex is the most stable to redox reactions and active as an electrocatalyst. Third, a molybdenum catalyst based on the redox non-innocent PDI ligand framework is also shown to produce hydrogen in the presence of acid.
The second part of this dissertation describes creating functional interfaces between chemical and biological models at electrode surfaces to create electroactive systems. First, covalent tethering of the redox probe ferrocene to thiol-functionalized reduced graphene oxide is demonstrated. I demonstrate that this attachment is via the thiol functional groups. Second, I demonstrate the ability to use electricity in combination with light to drive production of hydrogen by the anaerobic, phototrophic microorganism Heliobacterium modesticaldum.
ContributorsLaureanti, Joseph Anthony (Author) / Jones, Anne K. (Thesis advisor) / Moore, Thomas (Committee member) / Redding, Kevin E. (Committee member) / Arizona State University (Publisher)
Created2017
Description
Anthropogenic processes have increased the concentration of toxic Se, As and N in water. Oxo-anions of these species are poisonous to aquatic and terrestrial life. Current remediation techniques have low selectivity towards their removal. Understanding the chemistry and physics which control oxo-anion adsorption on metal oxide and the catalytic nitrate reduction to inform improved remediation technologies can be done using Density functional theory (DFT) calculations. The adsorption of selenate, selenite, and arsenate was investigated on the alumina and hematite to inform sorbent design strategies. Adsorption energies were calculated as a function of surface structure, composition, binding motif, and pH within a hybrid implicit-explicit solvation strategy. Correlations between surface property descriptors including water network structure, cationic species identity, and facet and the adsorption energies of the ions show that the surface water network controls the adsorption energy more than any other, including the cationic species of the metal-oxide. Additionally, to achieve selectivity for selenate over sulphate, differences in their electronic structure must be exploited, for example by the reduction of selenate to selenite by Ti3+ cations.
Thermochemical or electrochemical reduction pathways to convert NO3- to N2 or NH3, which are benign or value-added products, respectively are examined over single-atom electrocatalysts (SAC) in Cu. The activity and selectivity for nitrate reduction are compared with the competitive hydrogen evolution reaction (HER). Cu suppresses HER but produces toxic NO2- because of a high activation barrier for cleaving the second N-O bond. SACs provide secondary sites for reaction and break traditional linear scaling relationships. Ru-SACs selectively produce NH3 because N-O bond scission is facile, and the resulting N remains isolated on SAC sites; reacting with H+ from solvating H2O to form ammonia. Conversely, Pd-SAC forms N2 because the reduced N* atoms migrate to the Cu surface, which has a low H availability, allowing N atoms to combine to N2. This relation between N* binding preference and reduction product is demonstrated across an array of SAC elements.
Hence, the solvation effects on the surface critically alter the activity of adsorption and catalysis and the removal of toxic pollutants can be improved by altering the surface water network.
ContributorsGupta, Srishti (Author) / Muhich, Christopher L (Thesis advisor) / Singh, Arunima (Committee member) / Emady, Heather (Committee member) / Westerhoff, Paul (Committee member) / Deng, Shuguang (Committee member) / Arizona State University (Publisher)
Created2023
Description
Due to the use of fertilizers, concentrations of harmful nitrate have increased in groundwater and surface waters globally in the last century. Water treatment plants primarily use separation techniques for nitrate treatment, but these technologies create a high nitrate concentration brine that is costly to dispose of. This dissertation focuses on catalytic hydrogenation, an emerging technology capable of reducing nitrate to nitrogen gas using hydrogen gas (H2). This technology reduces nitrate at rates >95% and is an improvement over technologies used at water treatment plants, because the nitrate is chemically transformed with harmless byproducts and no nitrate brine. The goal of this dissertation is to upgrade the maturity of catalytic nitrate hydrogenation systems by overcoming several barriers hindering the scale-up of this technology. Objective 1 is to compare different methods of attaching the bimetallic catalyst to a hollow-fiber membrane surface to find a method that results in 1) minimized catalyst loss, and 2) repeatable nitrate removal over several cycles. Results showed that the In-Situ MCfR-H2 deposition was successful in reducing nitrate at a rate of 1.1 min-1gPd-1 and lost less than 0.05% of attached Pd and In cumulatively over three nitrate treatment cycles. Objective 2 is to synthesize catalyst-films with varied In3+ precursor decorated over a Pd0 surface to show the technology can 1) reliably synthesize In-Pd catalyst-films with varied bimetallic ratios, and 2) optimize nitrate removal activity by varying In-Pd ratio. Results showed that nitrate removal activity was optimized with a rate constant of 0.190 mg*min-1L-1 using a catalyst-film with a 0.045 In-Pd ratio. Objective 3 is to perform nitrate reduction in a continuous flow reactor for two months to determine if nitrate removal activity can be sustained over extended operation and identify methods to overcome catalyst deactivation. Results showed that a combination of increased hydraulic residence time and reduced pH was successful in increasing the nitrate removal and decreasing harmful nitrite byproduct selectivity to 0%. These objectives increased the technology readiness of this technology by enabling the reuse of the catalyst, maximizing nitrate reduction activity, and achieving long-term nitrate removal.
ContributorsLevi, Juliana (Author) / Westerhoff, Paul (Thesis advisor) / Rittmann, Bruce (Thesis advisor) / Garcia-Segura, Sergi (Committee member) / Wong, Michael (Committee member) / Lind Thomas, Mary Laura (Committee member) / Emady, Heather (Committee member) / Arizona State University (Publisher)
Created2023
Description
This thesis develops molecular models for electron transport in molecular junctions and intra-molecular electron transfer. The goal is to identify molecular descriptors that afford a substantial simplification of these electronic processes.
First, the connection between static molecular polarizability and the molecular conductance is examined. A correlation emerges whereby the measured conductance of a tunneling junction decreases as a function of the calculated molecular polarizability for several systems, a result consistent with the idea of a molecule as a polarizable dielectric. A model based on a macroscopic extension of the Clausius-Mossotti equation to the molecular domain and Simmon’s tunneling model is developed to explain this correlation. Despite the simplicity of the theory, it paves the way for further experimental, conceptual and theoretical developments in the use of molecular descriptors to describe both conductance and electron transfer.
Second, the conductance of several biologically relevant, weakly bonded, hydrogen-bonded systems is systematically investigated. While there is no correlation between hydrogen bond strength and conductance, the results indicate a relation between the conductance and atomic polarizability of the hydrogen bond acceptor atom. The relevance of these results to electron transfer in biological systems is discussed.
Hydrogen production and oxidation using catalysts inspired by hydrogenases provides a more sustainable alternative to the use of precious metals. To understand electrochemical and spectroscopic properties of a collection of Fe and Ni mimics of hydrogenases, high-level density functional theory calculations are described. The results, based on a detailed analysis of the energies, charges and molecular orbitals of these metal complexes, indicate the importance of geometric constraints imposed by the ligand on molecular properties such as acidity and electrocatalytic activity. Based on model calculations of several intermediates in the catalytic cycle of a model NiFe complex, a hypothetical reaction mechanism, which very well agrees with the observed experimental results, is proffered.
Future work related to this thesis may involve the systematic analysis of chemical reactivity in constrained geometries, a subject of importance if the context of enzymatic activity. Another, more intriguing direction is related to the fundamental issue of reformulating Marcus theory in terms of the molecular dielectric response function.
First, the connection between static molecular polarizability and the molecular conductance is examined. A correlation emerges whereby the measured conductance of a tunneling junction decreases as a function of the calculated molecular polarizability for several systems, a result consistent with the idea of a molecule as a polarizable dielectric. A model based on a macroscopic extension of the Clausius-Mossotti equation to the molecular domain and Simmon’s tunneling model is developed to explain this correlation. Despite the simplicity of the theory, it paves the way for further experimental, conceptual and theoretical developments in the use of molecular descriptors to describe both conductance and electron transfer.
Second, the conductance of several biologically relevant, weakly bonded, hydrogen-bonded systems is systematically investigated. While there is no correlation between hydrogen bond strength and conductance, the results indicate a relation between the conductance and atomic polarizability of the hydrogen bond acceptor atom. The relevance of these results to electron transfer in biological systems is discussed.
Hydrogen production and oxidation using catalysts inspired by hydrogenases provides a more sustainable alternative to the use of precious metals. To understand electrochemical and spectroscopic properties of a collection of Fe and Ni mimics of hydrogenases, high-level density functional theory calculations are described. The results, based on a detailed analysis of the energies, charges and molecular orbitals of these metal complexes, indicate the importance of geometric constraints imposed by the ligand on molecular properties such as acidity and electrocatalytic activity. Based on model calculations of several intermediates in the catalytic cycle of a model NiFe complex, a hypothetical reaction mechanism, which very well agrees with the observed experimental results, is proffered.
Future work related to this thesis may involve the systematic analysis of chemical reactivity in constrained geometries, a subject of importance if the context of enzymatic activity. Another, more intriguing direction is related to the fundamental issue of reformulating Marcus theory in terms of the molecular dielectric response function.
ContributorsKhezr Seddigh Mazinani, Shobeir (Author) / Mujica, Vladimiro (Thesis advisor) / Pilarisetty, Tarakeshwar (Committee member) / Angell, Charles A (Committee member) / Jones, Anne K (Committee member) / Arizona State University (Publisher)
Created2015
Description
Non-stoichiometric oxides play a critical role in many catalytic, energy, and sensing technologies, providing the ability to reversibly exchange oxygen with the ambient environment through the creation and annihilation of surface oxygen vacancies. Oxygen exchange at the surfaces of these materials is strongly influenced by atomic structure, which varies significantly across nanoparticle surfaces. The studies presented herein elucidate the relationship between surface structure behaviors and oxygen exchange reactions on ceria (CeO2) catalyst materials. In situ aberration-corrected transmission electron microscopy (AC-TEM) techniques were developed and employed to correlate dynamic atomic-level structural heterogeneities to local oxygen vacancy activity.
A model Ni/CeO2 catalyst was used to probe the role of a ceria support during hydrocarbon reforming reactions, and it was revealed that carbon formation was inhibited on Ni metal nanoparticles due to the removal of lattice oxygen from the ceria support and subsequent oxidation of adsorbed decomposed hydrocarbon products. Atomic resolution observations of surface oxygen vacancy creation and annihilation were performed on CeO2 nanoparticle surfaces using a novel time-resolved in situ AC-TEM approach. Cation displacements were found to be related to oxygen vacancy creation and annihilation, and the most reactive surface oxygen sites were identified by monitoring the frequency of cation displacements. In addition, the dynamic evolution of CeO2 surface structures was characterized with high temporal resolution AC-TEM imaging, which resulted in atomic column positions and occupancies to be determined with a combination of spatial precision and temporal resolution that had not previously been achieved. As a result, local lattice expansions and contractions were observed on ceria surfaces, which were likely related to cyclic oxygen vacancy activity. Finally, local strain fields on CeO2 surfaces were quantified, and it was determined that local strain enhanced the ability of a surface site to create oxygen vacancies. Through the characterization of dynamic surface structures with advanced AC-TEM techniques, an improvement in the fundamental understanding of how ceria surfaces influence and control oxygen exchange reactions was obtained.
A model Ni/CeO2 catalyst was used to probe the role of a ceria support during hydrocarbon reforming reactions, and it was revealed that carbon formation was inhibited on Ni metal nanoparticles due to the removal of lattice oxygen from the ceria support and subsequent oxidation of adsorbed decomposed hydrocarbon products. Atomic resolution observations of surface oxygen vacancy creation and annihilation were performed on CeO2 nanoparticle surfaces using a novel time-resolved in situ AC-TEM approach. Cation displacements were found to be related to oxygen vacancy creation and annihilation, and the most reactive surface oxygen sites were identified by monitoring the frequency of cation displacements. In addition, the dynamic evolution of CeO2 surface structures was characterized with high temporal resolution AC-TEM imaging, which resulted in atomic column positions and occupancies to be determined with a combination of spatial precision and temporal resolution that had not previously been achieved. As a result, local lattice expansions and contractions were observed on ceria surfaces, which were likely related to cyclic oxygen vacancy activity. Finally, local strain fields on CeO2 surfaces were quantified, and it was determined that local strain enhanced the ability of a surface site to create oxygen vacancies. Through the characterization of dynamic surface structures with advanced AC-TEM techniques, an improvement in the fundamental understanding of how ceria surfaces influence and control oxygen exchange reactions was obtained.
ContributorsLawrence, Ethan Lee (Author) / Crozier, Peter A. (Thesis advisor) / Lin, Jerry (Committee member) / Liu, Jingyue (Committee member) / Petuskey, William (Committee member) / Arizona State University (Publisher)
Created2019
Description
Redox enzymes represent a big group of proteins and they serve as catalysts for
biological processes that involve electron transfer. These proteins contain a redox center
that determines their functional properties, and hence, altering this center or incorporating
non-biological redox cofactor to proteins has been used as a means to generate redox
proteins with desirable activities for biological and chemical applications. Porphyrins and
Fe-S clusters are among the most common cofactors that biology employs for electron
transfer processes and there have been many studies on potential activities that they offer
in redox reactions.
In this dissertation, redox activity of Fe-S clusters and catalytic activity of porphyrins
have been explored with regard to protein scaffolds. In the first part, modular property of
repeat proteins along with previously established protein design principles have been
used to incorporate multiple Fe-S clusters within the repeat protein scaffold. This study is
the first example of exploiting a single scaffold to assemble a determined number of
clusters. In exploring the catalytic activity of transmetallated porphyrins, a cobalt-porphyrin
binding protein known as cytochrome c was employed in a water oxidation
photoelectrochemical cell. This system can be further coupled to a hydrogen production
electrode to achieve a full water splitting tandem cell. Finally, a cobalt-porphyrin binding
protein known as cytochrome b562 was employed to design a whole cell catalysis system,
and the activity of the surface-displayed protein for hydrogen production was explored
photochemically. This system can further be expanded for directed evolution studies and
high-throughput screening.
biological processes that involve electron transfer. These proteins contain a redox center
that determines their functional properties, and hence, altering this center or incorporating
non-biological redox cofactor to proteins has been used as a means to generate redox
proteins with desirable activities for biological and chemical applications. Porphyrins and
Fe-S clusters are among the most common cofactors that biology employs for electron
transfer processes and there have been many studies on potential activities that they offer
in redox reactions.
In this dissertation, redox activity of Fe-S clusters and catalytic activity of porphyrins
have been explored with regard to protein scaffolds. In the first part, modular property of
repeat proteins along with previously established protein design principles have been
used to incorporate multiple Fe-S clusters within the repeat protein scaffold. This study is
the first example of exploiting a single scaffold to assemble a determined number of
clusters. In exploring the catalytic activity of transmetallated porphyrins, a cobalt-porphyrin
binding protein known as cytochrome c was employed in a water oxidation
photoelectrochemical cell. This system can be further coupled to a hydrogen production
electrode to achieve a full water splitting tandem cell. Finally, a cobalt-porphyrin binding
protein known as cytochrome b562 was employed to design a whole cell catalysis system,
and the activity of the surface-displayed protein for hydrogen production was explored
photochemically. This system can further be expanded for directed evolution studies and
high-throughput screening.
ContributorsBahrami Dizicheh, Zahra (Author) / Ghirlanda, Giovanna (Thesis advisor) / Allen, James P. (Committee member) / Seo, Dong Kyun (Committee member) / Arizona State University (Publisher)
Created2019
Description
Esters are important solvents in multiple industries including adhesives, food, and pharmaceuticals. Although esters are biodegradable solvents, the conventional process of producing them is not eco-friendly because they are largely derived from petrochemicals. This has led scientists to consider implementing biological routes in their production process by incorporating heterologous or improving inherent esterification pathways. However, due to inequality in the biosynthesis of esters and their precursors (organic acid and alcohol), a significant amount of precursors are left unconverted, thereby lowering overall esterification efficiency. Therefore, the primary goal of the current research is to improve the ester titers by incorporating one more step of in vitro esterification with the culture broth, thereby esterifying the unconverted precursors using high efficiency commercial enzymes in the presence of compatible organic solvent. In principle, the medium containing the precursors will be treated with the enzyme in presence of organic solvent, where the precursors will be distributed in both the phases, aqueous and organic, based on their polarity, and the enzymatic esterification will happen at the interface. Hence, as a first step, efforts were made to optimize the reaction conditions, beginning with choosing the most efficient organic solvent and corresponding enzyme candidate. Our results showed that, for production of ethyl acetate through this reactive extraction approach, Novozyme435 exhibited significant esterification with chloroform, with almost 85% conversion efficiency. Further optimizations with phase ratios, pH and incubation time showed that the pH 6.0 (3.1 g/L) was the most optimum where ethyl acetate titer was found to improve 10 times than that at pH 7.0 (0.164 g/L) with the phase ratio of 1:1. The kinetic studies further added that the incubation at 37oC gives the maximum ethyl acetate production within 8h. After initial optimization studies, cell broth from E. coli cells transformed to overproduce an esterase was also tested with the reactive extraction method. It was found that there was a ~7.5X decrease in ethyl acetate production in the cell media versus synthetic samples with the same concentration of reactants. Such a large decrease indicates that enzymatic promiscuity or inhibition currently prevent the cell samples from reaching the same conversion as synthetic studies. To characterize the maximum reaction rate (Vmax) and affinity constants of the substrates to Novozym 435, further kinetic studies were performed with one minute of reaction. The mathematical model employed assumes that enzyme kinetics rather than diffusion was the rate limiting step, that the concentrations of reactants at the interface are equivalent to the initial concentration of reactants, and that neither substrate is an inhibitor. Vmax was found to be 18.5 Mmol min-1g-1 (of catalyst used), and the affinity constants were 0.957 M and 0.00557 M for acetic acid and ethanol respectively. Vmax was similar to literature values with Novozym 435, and the affinity constants indicate a much higher binding efficiency of ethanol in comparison to acetic acid, indicating that a cocktail of esters are likely produced from Novozym 435 in cell broth. Overall, moving away from fossil-fuel dependence is necessary to promote sustainable industry standards, and microbial cell factories combined with reactive extraction, if optimized for industrial applications, can replace harmful environmental procedures. By optimizing the reactive extraction process for ester production, biorefineries could become more competitive and economically feasible for numerous applications.
ContributorsKartchner, Danika (Author) / Varman, Arul Mozhy (Thesis director) / Nielsen, David (Committee member) / Soundappan, Thiagarajan (Committee member) / Barrett, The Honors College (Contributor) / Chemical Engineering Program (Contributor) / Watts College of Public Service & Community Solut (Contributor)
Created2022-05