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Description
The Southwestern Willow Flycatcher (Empidonax traillii extimus) has been studied for over two decades and listed as endangered for most of that time. Though the flycatcher has been granted protected status since 1995, critical habitat designation for the flycatcher has not shared the same history. Critical habitat designation is essential for achieving the long-term goals defined in the flycatcher recovery plan where emphasis is on both the protection of this species and "the habitats supporting these flycatchers [that] must be protected from threats and loss" (U.S. Fish and Wildlife Service 2002). I used a long-term data set of habitat characteristics collected at three study areas along the Lower Colorado River to develop a method for quantifying habitat quality for flycatcher. The data set contained flycatcher nest observations (use) and habitat availability (random location) from 2003-2010 that I statistically analyzed for flycatcher selection preferences. Using both Pearson's Chi-square test and SPSS Principal Component Analysis (PCA) I determined that flycatchers were selecting 30 habitat traits significantly different among an initial list of 127 habitat characteristics. Using PCA, I calculated a weighted value of influence for each significant trait per study area and used those values to develop a habitat classification system to build predictive models for flycatcher habitat quality. I used ArcGIS® Model Builder to develop three habitat suitability models for each of the habitat types occurring in western riparian systems, native, mixed exotic and exotic dominated that are frequented by breeding flycatchers. I designed a fourth model, Topock Marsh, to test model accuracy on habitat quality for flycatchers using reserved accuracy assessment points of previous nest locations. The results of the fourth model accurately predicted a decline in habitat at Topock Marsh that was confirmed by SWCA survey reports released in 2011 and 2012 documenting a significant decline in flycatcher productivity in the Topock Marsh study area.
ContributorsChenevert-Steffler, Ann (Author) / Miller, William (Thesis advisor) / Bateman, Heather (Committee member) / Alford, Eddie (Committee member) / Arizona State University (Publisher)
Created2013
Description
Biological diversity is threatened by increasing anthropogenic modification of natural environments and increasing demands on natural resources. Sonoran desert tortoises (Gopherus morafkai) currently have Candidate status under the Endangered Species Act (ESA) based on health and habitat threats. To ensure this animal persists in the midst of multiple threats requires an understanding of the life history and ecology of each population. I looked at one physiological and one behavioral aspect of a population of tortoises at the Sugarloaf Mountain (SL) study site in central Arizona, USA. I used 21 years of capture-recapture records to estimate growth parameters of the entire population. I investigated habitat selection of juvenile tortoises by selecting 117 locations of 11 tortoises that had been tracked by radio-telemetry one to three times weekly for two years, selecting locations from both summer active season and during winter hibernation. I compared 22 microhabitat variables of tortoise locations to random SL locations to determine habitat use and availability. Male tortoises at SL reach a greater asymptotic length than females, and males and females appear to grow at the same rate. Juvenile tortoises at the SL site use steep rocky hillsides with high proportions of sand and annual vegetation, few succulents, and enclosed shelters in summer. They use enclosed shelters on steep slopes for winter hibernation. An understanding of these features can allow managers to quantify Sonoran desert tortoise habitat needs and life history characteristics and to understand the impact of land use policies.
ContributorsBridges, Andrew (Author) / Bateman, Heather L (Thesis advisor) / Miller, William (Committee member) / Ulrich, Jon (Committee member) / Arizona State University (Publisher)
Created2012
Description
An understanding of diet habits is crucial in implementing proper management strategies for wildlife. Diet analysis, however, remains a challenge for ruminant species. Microhistological analysis, the method most often employed in herbivore diet studies, is tedious and time consuming. In addition, it requires considerable training and an extensive reference plant collection. The development of DNA barcoding (species identification using a standardized DNA sequence) and the availability of recent DNA sequencing techniques offer new possibilities in diet analysis for ungulates. Using fecal material collected from controlled feeding trials on pygmy goats, (Capra hicus), novel DNA barcoding technology using the P6-loop of the chloroplast trnL (UAA) intron was compared with the traditional microhistological technique. At its current stage of technological development, this study demonstrated that DNA barcoding did not enhance the ability to detect plant species in herbivore diets. A higher mean species composition was reported with microhistological analysis (79%) as compared to DNA barcoding (50%). Microhistological analysis consistently reported a higher species presence by forage class. For affect positive species identification, microhistology estimated an average of 89% correct detection in control diets, while DNA barcoding estimated 50% correct detection of species. It was hypothesized that a number of factors, including variation in chloroplast content in feed species and the effect of rumen bacteria on degradation of DNA, influenced the ability to detect plant species in herbivore diets and concluded that while DNA barcoding opens up new possibilities in the study of plant-herbivore interactions, further studies are needed to standardize techniques and for DNA bar-coding in this context.
ContributorsMurphree, Julie Joan (Author) / Miller, William H. (Thesis advisor) / Steele, Kelly (Committee member) / Salywon, Andrew (Committee member) / Arizona State University (Publisher)
Created2012
Description
Since its inception in 1973, the Endangered Species Act has been met with both praise and criticism. More than 40 years later, the Act is still polarizing, with proponents applauding its power to protect species and critics arguing against its perceived ineffectiveness and potential mismanagement. Recovery plans, which were required by the 1988 amendments to the Act, play an important role in organizing efforts to protect and recover species under the Act. In 1999, in an effort to evaluate the process, the Society for Conservation Biology commissioned an independent review of endangered species recovery planning. From these findings, the SCB made key recommendations for how management agencies could improve the recovery planning process, after which the Fish and Wildlife Service and the National Marine Fisheries Service redrafted their recovery planning guidelines. One important recommendation called for recovery plans to make threats a primary focus, including organizing and prioritizing recovery tasks for threat abatement. Here, I seek to determine the extent to which SCB recommendations were incorporated into these new guidelines, and if, in turn, the recommendations regarding threats manifested in recovery plans written under the new guidelines. I found that the guidelines successfully incorporated most SCB recommendations, except those that addressed monitoring. As a result, recent recovery plans have improved in their treatment of threats, but still fail to adequately incorporate threat monitoring. This failure suggests that developing clear guidelines for monitoring should be an important priority in future ESA recovery planning.
ContributorsTroyer, Caitlin (Author) / Gerber, Leah (Thesis advisor) / Minteer, Ben (Committee member) / Guston, David (Committee member) / Arizona State University (Publisher)
Created2014
ContributorsChang, Ruihong (Performer) / ASU Library. Music Library (Publisher)
Created2018-03-29
Description
Consideration of both biological and human-use dynamics in coupled social-ecological systems is essential for the success of interventions such as marine reserves. As purely human institutions, marine reserves have no direct effects on ecological systems. Consequently, the success of a marine reserve depends on managers` ability to alter human behavior in the direction and magnitude that supports reserve objectives. Further, a marine reserve is just one component in a larger coupled social-ecological system. The social, economic, political, and biological landscape all determine the social acceptability of a reserve, conflicts that arise, how the reserve interacts with existing fisheries management, accuracy of reserve monitoring, and whether the reserve is ultimately able to meet conservation and fishery enhancement goals. Just as the social-ecological landscape is critical at all stages for marine reserve, from initial establishment to maintenance, the reserve in turn interacts with biological and human use dynamics beyond its borders. Those interactions can lead to the failure of a reserve to meet management goals, or compromise management goals outside the reserve. I use a bio-economic model of a fishery in a spatially patchy environment to demonstrate how the pre-reserve fisheries management strategy determines the pattern of fishing effort displacement once the reserve is established, and discuss the social, political, and biological consequences of different patterns for the reserve and the fishery. Using a stochastic bio-economic model, I demonstrate how biological and human use connectivity can confound the accurate detection of reserve effects by violating assumptions in the quasi-experimental framework. Finally, I examine data on recreational fishing site selection to investigate changes in response to the announcement of enforcement of a marine reserve in the Gulf of California, Mexico. I generate a scale of fines that would fully or partially protect the reserve, providing a data-driven way for managers to balance biological and socio-economic goals. I suggest that natural resource managers consider human use dynamics with the same frequency, rigor, and tools as they do biological stocks.
ContributorsFujitani, Marie (Author) / Abbott, Joshua (Thesis advisor) / Fenichel, Eli (Thesis advisor) / Gerber, Leah (Committee member) / Anderies, John (Committee member) / Arizona State University (Publisher)
Created2014
Description
In riparian ecosystems, reptiles and amphibians are good indicators of environmental conditions. Herpetofauna have been linked to specific microhabitat characteristics, microclimates, and water resources in riparian forests. My objective was to relate herpetofauna abundance to changes in riparian habitat along the Virgin River caused by the Tamarix biological control agent, Diorhabda carinulata, and riparian restoration.
During 2013 and 2014, vegetation and herpetofauna were monitored at 21 riparian locations along the Virgin River via trapping and visual encounter surveys. Study sites were divided into four stand types based on density and percent cover of dominant trees (Tamarix, Prosopis, Populus, and Salix) and presence of restoration activities: Tam, Tam-Pros, Tam-Pop/Sal, and Restored Tam-Pop/Sal. Restoration activities consisted of mechanical removal of non-native trees, transplanting native trees, and introduction of water flow. All sites were affected by biological control. I predicted that herpetofauna abundance would vary between stand types and that herpetofauna abundance would be greatest in Restored Tam-Pop/Sal sites due to increased habitat openness and variation following restoration efforts.
Results from trapping indicated that Restored Tam-Pop/Sal sites had three times more total lizard and eight times more Sceloporus uniformis captures than other stand types. Anaxyrus woodhousii abundance was greatest in Tam-Pop/Sal and Restored Tam-Pop/Sal sites. Visual encounter surveys indicated that herpetofauna abundance was greatest in the Restored Tam-Pop/Sal site compared to the adjacent Unrestored Tam-Pop/Sal site. Habitat variables were reduced to six components using a principle component analysis and significant differences were detected among stand types. Restored Tam-Pop/Sal sites were most similar to Tam-Pop/Sal sites. S. uniformis were positively associated with large woody debris and high densities of Populus, Salix, and large diameter Prosopis.
Restored Tam-Pop/Sal sites likely supported higher abundances of herpetofauna, as these areas exhibited greater habitat heterogeneity. Restoration activities created a mosaic habitat by reducing canopy cover and increasing native tree density and surface water. Natural resource managers should consider implementing additional restoration efforts following biological control when attempting to restore riparian areas dominated by Tamarix and other non-native trees.
During 2013 and 2014, vegetation and herpetofauna were monitored at 21 riparian locations along the Virgin River via trapping and visual encounter surveys. Study sites were divided into four stand types based on density and percent cover of dominant trees (Tamarix, Prosopis, Populus, and Salix) and presence of restoration activities: Tam, Tam-Pros, Tam-Pop/Sal, and Restored Tam-Pop/Sal. Restoration activities consisted of mechanical removal of non-native trees, transplanting native trees, and introduction of water flow. All sites were affected by biological control. I predicted that herpetofauna abundance would vary between stand types and that herpetofauna abundance would be greatest in Restored Tam-Pop/Sal sites due to increased habitat openness and variation following restoration efforts.
Results from trapping indicated that Restored Tam-Pop/Sal sites had three times more total lizard and eight times more Sceloporus uniformis captures than other stand types. Anaxyrus woodhousii abundance was greatest in Tam-Pop/Sal and Restored Tam-Pop/Sal sites. Visual encounter surveys indicated that herpetofauna abundance was greatest in the Restored Tam-Pop/Sal site compared to the adjacent Unrestored Tam-Pop/Sal site. Habitat variables were reduced to six components using a principle component analysis and significant differences were detected among stand types. Restored Tam-Pop/Sal sites were most similar to Tam-Pop/Sal sites. S. uniformis were positively associated with large woody debris and high densities of Populus, Salix, and large diameter Prosopis.
Restored Tam-Pop/Sal sites likely supported higher abundances of herpetofauna, as these areas exhibited greater habitat heterogeneity. Restoration activities created a mosaic habitat by reducing canopy cover and increasing native tree density and surface water. Natural resource managers should consider implementing additional restoration efforts following biological control when attempting to restore riparian areas dominated by Tamarix and other non-native trees.
ContributorsMosher, Kent (Author) / Bateman, Heather L (Thesis advisor) / Stromberg, Juliet C. (Committee member) / Miller, William H. (Committee member) / Arizona State University (Publisher)
Created2014
Description
Worldwide, riverine floodplains are among the most endangered landscapes. In response to anthropogenic impacts, riverine restoration projects are considerably increasing. However, there is a paucity of information on how riparian rehabilitation activities impact non-avian wildlife communities. I evaluated herpetofauna abundance, species richness, diversity (i.e., Shannon and Simpson indices), species-specific responses, and riparian microhabitat characteristics along three reaches (i.e., wildland, urban rehabilitated, and urban disturbed) of the Salt River, Arizona. The surrounding uplands of the two urbanized reaches were dominated by the built environment (i.e., Phoenix metropolitan area). I predicted that greater diversity of microhabitat and lower urbanization would promote herpetofauna abundance, richness, and diversity. In 2010, at each reach, I performed herpetofauna visual surveys five times along eight transects (n=24) spanning the riparian zone. I quantified twenty one microhabitat characteristics such as ground substrate, vegetative cover, woody debris, tree stem density, and plant species richness along each transect. Herpetofauna species richness was the greatest along the wildland reach, and the lowest along the urban disturbed reach. The wildland reach had the greatest diversity indices, and diversity indices of the two urban reaches were similar. Abundance of herpetofauna was approximately six times lower along the urban disturbed reach compared to the two other reaches, which had similar abundances. Principal Component Analysis (PCA) reduced microhabitat variables to five factors, and significant differences among reaches were detected. Vegetation structure complexity, vegetation species richness, as well as densities of Prosopis (mesquite), Salix (willow), Populus (cottonwood), and animal burrows had a positive correlation with at least one of the three herpetofauna community parameter quantified (i.e., herpetofauna abundance, species richness, and diversity indices), and had a positive correlation with at least one herpetofauna species. Overall, rehabilitation activities positively influenced herpetofauna abundance and species richness, whereas urbanization negatively influenced herpetofauna diversity indices. Based on herpetofauna/microhabitat correlations established, I developed recommendations regarding microhabitat features that should be created in order to promote herpetofauna when rehabilitating degraded riparian systems. Recommendations are to plant vegetation of different growth habit, provide woody debris, plant Populus, Salix, and Prosopis of various ages and sizes, and to promote small mammal abundance.
ContributorsBanville, Mélanie Josianne (Author) / Bateman, Heather L (Thesis advisor) / Brady, Ward (Committee member) / Stromberg, Juliet (Committee member) / Arizona State University (Publisher)
Created2011
Description
Populations of resident Canada geese (Branta canadensis) that nest and reside within the contiguous United States have increased at a rate of 7.9% per year to over 3.5 million over the last few decades. Enlarged population levels have resulted in conflicts between geese and humans, including property damage and human health and safety concerns. Noticeable growth of the population of Canada geese in the Indian Bend Wash area of Scottsdale, AZ has been observed in recent years sparking concern that this population will continue to grow at high rates as seen in other urban areas throughout North America. This study was initiated to determine the current population structure, distribution, and productivity of this population of resident geese. During the 2009 to 2010 post-breeding molt, 255 geese were captured and affixed with neck collars allowing individual identification. I conducted surveys from October 2008 to September 2010 and calculated weekly population estimates from mark recapture survey data using the Lincoln-Peterson method. Productivity was also investigated. Nesting was largely limited to one island within the study area, suggesting geese preferentially nest in insular areas to avoid human disturbance. Despite limited nesting opportunities, there was a significant population increase of 15 to 25% from 2009 to 2010 based on population estimates. Goose movement patterns indicate this population has a high level of site fidelity to nesting and molting areas, as has been found in other studies of resident Canada geese. I suggest that management should be implemented to 1) reduce the current population of resident geese through adult removal and 2) limit future recruitment into the population through control of reproduction and habitat modification.
ContributorsRay, Elizabeth (Author) / Miller, William (Thesis advisor) / Cunningham, Stanley (Committee member) / Bateman, Heather (Committee member) / Arizona State University (Publisher)
Created2011
Description
For the past 30 years wildlife biologists have debated the need of pronghorn antelope (Antilocapra americana) to drink freestanding water (free water). Some have suggested that pronghorn may feed at night to increase preformed water (plant moisture) intake, thus decreasing their dependence on free water. Pronghorn diet composition and nutrient intake is integral to understanding water available to pronghorn through preformed and metabolic sources. The dual purpose of this study was to determine plant composition of pronghorn diets, and to examine whether night feeding provides a water allocation advantage by testing for differences between day and night and modeling free water requirements during biologically critical seasons and years of different precipitation. I determined species composition, selected nutrients, and moisture content of American pronghorn diets on Perry Mesa, Arizona in March, May, June and August of 2008 and 2009. I used microhistological analysis of fecal samples to determine percent plant composition of pronghorn diets. I used forage samples to evaluate the nutrient composition of those diets for moisture, crude protein and structural carbohydrates, and to calculate metabolic water. I used calculations proposed by Fox et al. (2000) to model free water requirements and modified the equations to reflect increased requirements for lactation. Diet analysis revealed that pronghorn used between 67% and 99% forbs and suggested fair range conditions. Preformed water was not significantly different between night and day. Night feeding appeared to be of marginal advantage, providing an average potential 9% preformed water increase in 2008, and 3% in 2009. The model indicated that neither male nor female pronghorn could meet their water requirements from preformed and metabolic water during any time period, season or year. The average free water requirements for females ranged from 0.67 L/animal/day (SE 0.06) in March, 2008 to 3.12 L/animal/day (SE 0.02) in June, 2009. The model showed that American pronghorn on Perry Mesa require access to free water during biological stress periods.
ContributorsTluczek, Melanie (Author) / Miller, William H. (Thesis advisor) / Brown, David E. (Committee member) / Steele, Kelly (Committee member) / Arizona State University (Publisher)
Created2012