Matching Items (4)
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- All Subjects: Phage
- All Subjects: UV
- Creators: Alum, Absar
Description
Research in microbial biofuels has dramatically increased over the last decade. The bulk of this research has focused on increasing the production yields of cyanobacteria and algal cells and improving extraction processes. However, there has been little to no research on the potential impact of viruses on the yields of these phototrophic microbes for biofuel production. Viruses have the potential to significantly reduce microbial populations and limit their growth rates. It is therefore important to understand how viruses affect phototrophic microbes and the prevalence of these viruses in the environment. For this study, phototrophic microbes were grown in glass bioreactors, under continuous light and aeration. Detection and quantification of viruses of both environmental and laboratory microbial strains were measured through the use of a plaque assay. Plates were incubated at 25º C under continuous direct florescent light. Several environmental samples were taken from Tempe Town Lake (Tempe, AZ) and all the samples tested positive for viruses. Virus free phototrophic microbes were obtained from plaque assay plates by using a sterile loop to scoop up a virus free portion of the microbial lawn and transferred into a new bioreactor. Isolated cells were confirmed virus free through subsequent plaque assays. Viruses were detected from the bench scale bioreactors of Cyanobacteria Synechocystis PCC 6803 and the environmental samples. Viruses were consistently present through subsequent passage in fresh cultures; demonstrating viral contamination can be a chronic problem. In addition TEM was performed to examine presence or viral attachment to cyanobacterial cells and to characterize viral particles morphology. Electron micrographs obtained confirmed viral attachment and that the viruses detected were all of a similar size and shape. Particle sizes were measured to be approximately 50-60 nm. Cell reduction was observed as a decrease in optical density, with a transition from a dark green to a yellow green color for the cultures. Phototrophic microbial viruses were demonstrated to persist in the natural environment and to cause a reduction in algal populations in the bioreactors. Therefore it is likely that viruses could have a significant impact on microbial biofuel production by limiting the yields of production ponds.
ContributorsKraft, Kyle (Author) / Abbaszadegan, Morteza (Thesis advisor) / Alum, Absar (Committee member) / Fox, Peter (Committee member) / Arizona State University (Publisher)
Created2014
Description
Turbidity is a known problem for UV water treatment systems as suspended particles can shield contaminants from the UV radiation. UV systems that utilize a reflective radiation chamber may be able to decrease the impact of turbidity on the efficacy of the system. The purpose of this study was to determine how kaolin clay and gram flour turbidity affects inactivation of Escherichia coli (E. coli) when using a UV system with a reflective chamber. Both sources of turbidity were shown to reduce the inactivation of E. coli with increasing concentrations. Overall, it was shown that increasing kaolin clay turbidity had a consistent effect on reducing UV inactivation across UV doses. Log inactivation was reduced by 1.48 log for the low UV dose and it was reduced by at least 1.31 log for the low UV dose. Gram flour had a similar effect to the clay at the lower UV dose, reducing log inactivation by 1.58 log. At the high UV dose, there was no change in UV inactivation with an increase in turbidity. In conclusion, turbidity has a significant impact on the efficacy of UV disinfection. Therefore, removing turbidity from water is an essential process to enhance UV efficiency for the disinfection of microbial pathogens.
ContributorsMalladi, Rohith (Author) / Abbaszadegan, Morteza (Thesis director) / Alum, Absar (Committee member) / Fox, Peter (Committee member) / School of Human Evolution & Social Change (Contributor) / School of Life Sciences (Contributor) / Barrett, The Honors College (Contributor)
Created2020-05
Description
This project aims to address the current protocol regarding the diagnosis and treatment of traumatic brain injury (TBI) in medical industries around the world. Although there are various methods used to qualitatively determine if TBI has occurred to a patient, this study attempts to aid in the creation of a system for quantitative measurement of TBI and its relative magnitude. Through a method of artificial evolution/selection called phage display, an antibody that binds highly specifically to a post-TBI upregulated brain chondroitin sulfate proteoglycan called neurocan has been identified. As TG1 Escheria Coli bacteria were infected with KM13 helper phage and M13 filamentous phage in conjunction, monovalent display of antibody fragments (ScFv) was performed. The ScFv bind directly to the neurocan and from screening, phage that produced ScFv's with higher affinity and specificity to neurocan were separated and purified. Future research aims to improve the ScFv characteristics through increased screening toward neurocan. The identification of a highly specific antibody could lead to improved targeting of neurocan post-TBI in-vivo, aiding researchers in quantitatively defining TBI by visualizing its magnitude.
ContributorsSeelig, Timothy Scott (Author) / Stabenfeldt, Sarah (Thesis director) / Ankeny, Casey (Committee member) / Barrett, The Honors College (Contributor) / Harrington Bioengineering Program (Contributor)
Created2015-05
Description
Since its first report in 1976, many outbreaks linked to Legionella have been reported in the world. These outbreaks are a public health concern because of legionellosis, which is found in two forms, Pontiac fever and Legionnaires disease. Legionnaires disease is a type of pneumonia responsible for the majority of the illness in the reported outbreaks of legionellosis. This study consists of an extensive literature review and experimental work on the aerosolization and UV inactivation of E.coli and Legionella under laboratory conditions. The literature review summarizes Legionella general information, occurrence, environmental conditions for its survival, transmission to human, collection and detection methodologies and Legionella disinfection in air and during water treatment processes.
E. coli was used as an surrogate for Legionella in experimentation due to their similar bacterial properties such as size, gram-negative rod-shaped, un-encapsulated and non-spore-forming bacterial cells. The accessibility and non-pathogenicity of E. coli also served as factors for the substitution.
Three methods of bacterial aerosolization were examined, these included an electric spray gun, an air spray gun and a hand-held spray bottle. A set of experiments were performed to examine E. coli aerosolization and transport in the aerosolization chamber (an air tight box) placed in a Biological Safety Cabinet. Spiked sample was sprayed through the opening from one side of the aerosolization chamber using the selected aerosolization methods. The air sampler was placed at the other side to collect 100 L air sample from the aerosolization chamber. A Tryptic Soy Agar plate was placed inside the air sampler to collect and subsequently culture E. coli cells from air. Results showed that the air spray gun has the best capability of aerosolizing bacteria cells under all the conditions examined in this study compared to the other two spray methods. In this study, we provide a practical and efficient method of bacterial aerosolization technique for microbial dispersion in air. The suggested method can be used in future research for microbial dispersion and transmission studies.
A set of experiments were performed to examine UV inactivation of E. coli and Legionella cells in air. Spiked samples were sprayed through the opening from one side of the aerosolization chamber using the air spray gun. A UV-C germicidal lamp inside the Biological Safety Cabinet was turned on after each spray. The air samples were collected as previously described. The application of UV-C for the inactivation of bacterial cells resulted in removing aerosolized E. coli and Legionella cells in air. A 1 log reduction was achieved with 5 seconds UV exposure time while 10 seconds UV exposure resulted in a 2 log bacterial reduction for both bacteria. This study shows the applicability of UV inactivation of pathogenic bacterial cells in air by short UV exposure time. This method may be applicable for the inactivation of Legionella in air ducts by installing germicidal UV lamps for protecting susceptible populations in certain indoor settings such as nursing homes or other community rooms.
E. coli was used as an surrogate for Legionella in experimentation due to their similar bacterial properties such as size, gram-negative rod-shaped, un-encapsulated and non-spore-forming bacterial cells. The accessibility and non-pathogenicity of E. coli also served as factors for the substitution.
Three methods of bacterial aerosolization were examined, these included an electric spray gun, an air spray gun and a hand-held spray bottle. A set of experiments were performed to examine E. coli aerosolization and transport in the aerosolization chamber (an air tight box) placed in a Biological Safety Cabinet. Spiked sample was sprayed through the opening from one side of the aerosolization chamber using the selected aerosolization methods. The air sampler was placed at the other side to collect 100 L air sample from the aerosolization chamber. A Tryptic Soy Agar plate was placed inside the air sampler to collect and subsequently culture E. coli cells from air. Results showed that the air spray gun has the best capability of aerosolizing bacteria cells under all the conditions examined in this study compared to the other two spray methods. In this study, we provide a practical and efficient method of bacterial aerosolization technique for microbial dispersion in air. The suggested method can be used in future research for microbial dispersion and transmission studies.
A set of experiments were performed to examine UV inactivation of E. coli and Legionella cells in air. Spiked samples were sprayed through the opening from one side of the aerosolization chamber using the air spray gun. A UV-C germicidal lamp inside the Biological Safety Cabinet was turned on after each spray. The air samples were collected as previously described. The application of UV-C for the inactivation of bacterial cells resulted in removing aerosolized E. coli and Legionella cells in air. A 1 log reduction was achieved with 5 seconds UV exposure time while 10 seconds UV exposure resulted in a 2 log bacterial reduction for both bacteria. This study shows the applicability of UV inactivation of pathogenic bacterial cells in air by short UV exposure time. This method may be applicable for the inactivation of Legionella in air ducts by installing germicidal UV lamps for protecting susceptible populations in certain indoor settings such as nursing homes or other community rooms.
ContributorsYao, Wei (Author) / Abbaszadegan, Morteza (Thesis advisor) / Fox, Peter (Committee member) / Alum, Absar (Committee member) / Arizona State University (Publisher)
Created2015