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Description
Locomotion of microorganisms is commonly observed in nature and some aspects of their motion can be replicated by synthetic motors. Synthetic motors rely on a variety of propulsion mechanisms including auto-diffusiophoresis, auto-electrophoresis, and bubble generation. Regardless of the source of the locomotion, the motion of any motor can be characterized by the translational and rotational velocity and effective diffusivity. In a uniform environment the long-time motion of a motor can be fully characterized by the effective diffusivity. In this work it is shown that when motors possess both translational and rotational velocity the motor transitions from a short-time diffusivity to a long-time diffusivity at a time of pi/w. The short-time diffusivities are two to three orders of magnitude larger than the diffusivity of a Brownian sphere of the same size, increase linearly with concentration, and scale as v^2/2w. The measured long-time diffusivities are five times lower than the short-time diffusivities, scale as v^2/{2Dr [1 + (w/Dr )^2]}, and exhibit a maximum as a function of concentration. The variation of a colloid's velocity and effective diffusivity to its local environment (e.g. fuel concentration) suggests that the motors can accumulate in a bounded system, analogous to biological chemokinesis. Chemokinesis of organisms is the non-uniform equilibrium concentration that arises from a bounded random walk of swimming organisms in a chemical concentration gradient. In non-swimming organisms we term this response diffusiokinesis. We show that particles that migrate only by Brownian thermal motion are capable of achieving non-uniform pseudo equilibrium distribution in a diffusivity gradient. The concentration is a result of a bounded random-walk process where at any given time a larger percentage of particles can be found in the regions of low diffusivity than in regions of high diffusivity. Individual particles are not trapped in any given region but at equilibrium the net flux between regions is zero. For Brownian particles the gradient in diffusivity is achieved by creating a viscosity gradient in a microfluidic device. The distribution of the particles is described by the Fokker-Planck equation for variable diffusivity. The strength of the probe concentration gradient is proportional to the strength of the diffusivity gradient and inversely proportional to the mean probe diffusivity in the channel in accordance with the no flux condition at steady state. This suggests that Brownian colloids, natural or synthetic, will concentrate in a bounded system in response to a gradient in diffusivity and that the magnitude of the response is proportional to the magnitude of the gradient in diffusivity divided by the mean diffusivity in the channel.
ContributorsMarine, Nathan Arasmus (Author) / Posner, Jonathan D (Thesis advisor) / Adrian, Ronald J (Committee member) / Frakes, David (Committee member) / Phelan, Patrick E (Committee member) / Santos, Veronica J (Committee member) / Arizona State University (Publisher)
Created2013
Description
Structural features of canonical wall-bounded turbulent flows are described using several techniques, including proper orthogonal decomposition (POD). The canonical wall-bounded turbulent flows of channels, pipes, and flat-plate boundary layers include physics important to a wide variety of practical fluid flows with a minimum of geometric complications. Yet, significant questions remain for their turbulent motions' form, organization to compose very long motions, and relationship to vortical structures. POD extracts highly energetic structures from flow fields and is one tool to further understand the turbulence physics. A variety of direct numerical simulations provide velocity fields suitable for detailed analysis. Since POD modes require significant interpretation, this study begins with wall-normal, one-dimensional POD for a set of turbulent channel flows. Important features of the modes and their scaling are interpreted in light of flow physics, also leading to a method of synthesizing one-dimensional POD modes. Properties of a pipe flow simulation are then studied via several methods. The presence of very long streamwise motions is assessed using a number of statistical quantities, including energy spectra, which are compared to experiments. Further properties of energy spectra, including their relation to fictitious forces associated with mean Reynolds stress, are considered in depth. After reviewing salient features of turbulent structures previously observed in relevant experiments, structures in the pipe flow are examined in greater detail. A variety of methods reveal organization patterns of structures in instantaneous fields and their associated vortical structures. Properties of POD modes for a boundary layer flow are considered. Finally, very wide modes that occur when computing POD modes in all three canonical flows are compared. The results demonstrate that POD extracts structures relevant to characterizing wall-bounded turbulent flows. However, significant care is necessary in interpreting POD results, for which modes can be categorized according to their self-similarity. Additional analysis techniques reveal the organization of smaller motions in characteristic patterns to compose very long motions in pipe flows. The very large scale motions are observed to contribute large fractions of turbulent kinetic energy and Reynolds stress. The associated vortical structures possess characteristics of hairpins, but are commonly distorted from pristine hairpin geometries.
ContributorsBaltzer, Jon Ronald (Author) / Adrian, Ronald J (Thesis advisor) / Calhoun, Ronald (Committee member) / Gelb, Anne (Committee member) / Herrmann, Marcus (Committee member) / Squires, Kyle D (Committee member) / Arizona State University (Publisher)
Created2012