Matching Items (19)
Description
Jupiter’s moon Europa is an active target of research because of its unique geology and its potential for habitability. Europa’s icy chaos disrupts and transforms the previous terrain, suggesting melting is involved. Chaos occurs alongside several types of endogenic surface features. These microfeatures are under <100 km2 in area and include uplifts and domes, pits, spots, and hybrid features. The distribution of microfeatures is known in the ~10% of the Europa’s surface that are covered by the regional mosaics (“RegMaps”). The efforts to connect microfeature formation to any kind of heat transport in Europa are confounded because microfeatures are difficult to identify outside of RegMaps because of low image resolutions. Finding microfeatures outside of RegMaps would provide new observational constraints for microfeature formation models.
First, I mapped microfeatures across four of Europa’s RegMaps and validated them against other mapping datasets. Microchaos features are the most numerous, followed by pits, domes, then hybrids. Spots are the least common features, and the smallest. Next, I mapped features in low-resolution images that covered the E15RegMap01 area to determine error rates and sources of omission or misclassification for features mapped in low-resolution images. Of all features originally mapped in the RegMap, pits and domes were the least likely to be re-mapped or positively identified (24.2% and 5%, respectively). Chaos, spots, and hybrids were accurately classified over 70% of the time. Quantitatively classifying these features using discriminant function analysis yielded comparable values of accuracy when compared to a human mapper. Finally, nearest-neighbor clustering analyses were used to show that pits are clustered in all regions, while chaos, domes, and hybrids vary in terms of their spatial clustering.
This work suggests that the most likely processes for microfeature formations is either the evolution of liquid water sills within Europa’s ice shell or cryovolcanism. Future work extending to more areas outside of the RegMaps can further refine microfeature formation models. The detection of liquid water at or near the surface is a major goal of multiple upcoming Europa missions; this work provides predictions that can be directly tested by these missions to maximize their scientific return.
First, I mapped microfeatures across four of Europa’s RegMaps and validated them against other mapping datasets. Microchaos features are the most numerous, followed by pits, domes, then hybrids. Spots are the least common features, and the smallest. Next, I mapped features in low-resolution images that covered the E15RegMap01 area to determine error rates and sources of omission or misclassification for features mapped in low-resolution images. Of all features originally mapped in the RegMap, pits and domes were the least likely to be re-mapped or positively identified (24.2% and 5%, respectively). Chaos, spots, and hybrids were accurately classified over 70% of the time. Quantitatively classifying these features using discriminant function analysis yielded comparable values of accuracy when compared to a human mapper. Finally, nearest-neighbor clustering analyses were used to show that pits are clustered in all regions, while chaos, domes, and hybrids vary in terms of their spatial clustering.
This work suggests that the most likely processes for microfeature formations is either the evolution of liquid water sills within Europa’s ice shell or cryovolcanism. Future work extending to more areas outside of the RegMaps can further refine microfeature formation models. The detection of liquid water at or near the surface is a major goal of multiple upcoming Europa missions; this work provides predictions that can be directly tested by these missions to maximize their scientific return.
ContributorsNoviello, Jessica (Author) / Rhoden, Alyssa R (Thesis advisor) / Christensen, Philip R. (Philip Russel) (Thesis advisor) / Williams, David A. (Committee member) / Robinson, Mark (Committee member) / Scowen, Paul (Committee member) / Arizona State University (Publisher)
Created2019
Description
Universal biology is an important astrobiological concept, specifically for the search for life beyond Earth. Over 1.2 million species have been identified on Earth, yet all life partakes in certain processes, such as homeostasis and replication. Furthermore, several aspects of biochemistry on Earth are thought to be universal, such as the use of organic macromolecules like proteins and nucleic acids. The presence of many biochemical features in empirical data, however, has never been thoroughly investigated. Moreover, the ability to generalize universal features of Earth biology to other worlds suffers from the epistemic problem of induction. Systems biology approaches offer means to quantify abstract patterns in living systems which can more readily be extended beyond Earth’s familiar planetary context. In particular, scaling laws, which characterize how a system responds to changes in size, have met with prior success in investigating universal biology.
This thesis rigorously tests the hypothesis that biochemistry is universal across life on Earth. The study collects enzyme data for annotated archaeal, bacterial, and eukaryotic genomes, in addition to metagenomes. This approach allows one to quantitatively define a biochemical system and sample across known biochemical diversity, while simultaneously exploring enzyme class scaling at both the level of both individual organisms and ecosystems. Using the Kyoto Encyclopedia of Genes and Genomes (KEGG) and the Joint Genome Institute’s Integrated Microbial Genomes and Microbiomes (JGI IMG/M) database, this thesis performs the largest comparative analysis of microbial enzyme content and biochemistry to date. In doing so, this thesis quantitatively explores the distribution of enzyme classes on Earth and adds constraints to notions of universal biochemistry on Earth.
This thesis rigorously tests the hypothesis that biochemistry is universal across life on Earth. The study collects enzyme data for annotated archaeal, bacterial, and eukaryotic genomes, in addition to metagenomes. This approach allows one to quantitatively define a biochemical system and sample across known biochemical diversity, while simultaneously exploring enzyme class scaling at both the level of both individual organisms and ecosystems. Using the Kyoto Encyclopedia of Genes and Genomes (KEGG) and the Joint Genome Institute’s Integrated Microbial Genomes and Microbiomes (JGI IMG/M) database, this thesis performs the largest comparative analysis of microbial enzyme content and biochemistry to date. In doing so, this thesis quantitatively explores the distribution of enzyme classes on Earth and adds constraints to notions of universal biochemistry on Earth.
ContributorsGagler, Dylan (Author) / Walker, Sara I (Thesis advisor) / Kempes, Chris (Committee member) / Trembath-Reichert, Elizabeth (Committee member) / Arizona State University (Publisher)
Created2020
Description
Astrobiology is premised on the idea that life beyond Earth can exist. Yet, everything known about life is derivative from life on Earth. To understand life beyond Earth, then, requires a definition of life that is abstracted beyond a particular geophysical context. To do this requires a formal understanding of the physical mechanisms by which matter is animated into life. At current, such descriptions are completely lacking for the emergence of life, but do exist for the emergence of consciousness. Namely, contemporary neuroscience offers definitions for universal physical processes that are in one-to-one correspondence with conscious experience. Since consciousness is a sufficient condition for life, these universal definitions of consciousness offer an interesting way forward in terms of the search for life in the cosmos. In this work, I systematically examine Integrated Information Theory (IIT), a well-established theory of consciousness, with the aim of applying it in both biological and astrobiological settings. Surprisingly, I discover major problems with Integrated Information Theory on two fronts: mathematical and epistemological. On the mathematical side, I show how degeneracies buried deep within the theory render it mathematically ill-defined, while on the epistemological side, I prove that the postulates of IIT are scientifically unfalsifiable and inherently metaphysical. Given that IIT is the preeminent theory of consciousness in modern neuroscience, these results have far-reaching implications in this field. In addition, I show that the epistemic issues of falsifiability that hamstring IIT apply quite generally to all contemporary theories of consciousness, which suggests a major reframing of the problem is necessary. The problems that I reveal in regard to defining consciousness offer an important parallel in regard to defining life, as both fields seek to define their topic of study in absence of an existing theoretical framework. To avoid metaphysical problems related to falsifiability, universal theories of both life and consciousness must be framed with respect to independent empirical observations that can be used to benchmark predictions from the theory. In this regard, I argue that the epistemic debate over scientific theories of consciousness should be used to inform the discussion regarding theoretical definitions of life.
ContributorsHanson, Jake (Author) / Walker, Sara I (Thesis advisor) / Desch, Steven J (Committee member) / Pavlic, Theodore P (Committee member) / Groppi, Christopher E (Committee member) / Shim, Sang-Heon (Committee member) / Arizona State University (Publisher)
Created2021
Description
The ability to find evidence of life on early Earth and other planets is constrained by the current understanding of biosignatures and our ability to differentiate fossils from abiotic mimics. When organisms transition from the living realm to the fossil record, their morphological and chemical characteristics are modified, usually resulting in the loss of information. These modifications can happen during early and late diagenesis and differ depending on local geochemical properties. These post-depositional modifications need to be understood to better interpret the fossil record. Siliceous hot spring deposits (sinters) are of particular interest for biosignature research as they are early Earth analog environments and targets for investigating the presence of fossil life on Mars. As silica-supersaturated fluids flow from the vent to the distal apron, they precipitate non-crystalline opal-A that fossilizes microbial communities at a range in scales (μm-cm). Therefore, many studies have documented the ties between the active microbial communities and the morphological and chemical biosignatures in hot springs. However, far less attention has been placed on understanding preservation in systems with complex mineralogy or how post-depositional alteration affects the retention of biosignatures. Without this context, it can be challenging to recognize biosignatures in ancient rocks. This dissertation research aims to refine our current understanding of biosignature preservation and retention in sinters. Biosignatures of interest include organic matter, microfossils, and biofabrics. The complex nature of hot springs requires a comprehensive understanding of biosignature preservation that is representative of variable chemistries and post-depositional alterations. For this reason, this dissertation research chapters are field site-based. Chapter 2 investigates biosignature preservation in an unusual spring with mixed opal-A-calcite mineralogy at Lýsuhóll, Iceland. Chapter 3 tracks how silica diagenesis modifies microfossil morphology and associated organic matter at Puchuldiza, Chile. Chapter 4 studies the effects of acid fumarolic overprinting on biosignatures in Gunnuhver, Iceland. To accomplish this, traditional geologic methods (mapping, petrography, X-ray diffraction, bulk elemental analyses) were combined with high-spatial-resolution elemental mapping to better understand diagenetic effects in these systems. Preservation models were developed to predict the types and styles of biosignatures that can be present depending on the depositional and geochemical context. Recommendations are also made for the types of deposits that are most likely to preserve biosignatures.
ContributorsJuarez Rivera, Marisol (Author) / Farmer, Jack D (Thesis advisor) / Hartnett, Hilairy E (Committee member) / Shock, Everett (Committee member) / Garcia-Pichel, Ferran (Committee member) / Trembath-Reichert, Elizabeth (Committee member) / Arizona State University (Publisher)
Created2021
Description
Astrobiology, as it is known by official statements and agencies, is “the study of the origin, evolution, distribution, and future of life in the universe” (NASA Astrobiology Insitute , 2018). This definition should suit a dictionary, but it may not accurately describe the research and motivations of practicing astrobiologists. Furthermore, it does little to characterize the context in which astrobiologists work. The aim of this project is to explore various social network structures within a large body of astrobiological research, intending to both further define the current motivations of astrobiological research and to lend context to these motivations. In this effort, two Web of Science queries were assembled to search for two contrasting corpora related to astrobiological research. The first search, for astrobiology and its close synonym, exobiology, returned a corpus of 3,229 journal articles. The second search, which includes the first and supplements it with further search terms (see Table 1) returned a corpus of 19,017 journal articles. The metadata for these articles were then used to construct various networks. The resulting networks describe an astrobiology that is well entrenched in other related fields, showcasing the interdisciplinarity of astrobiology in its emergence. The networks also showcase the entrenchment of astrobiology in the sociological context in which it is conducted—namely, its relative dependence on the United States government, which should prompt further discussion amongst astrobiology researchers.
ContributorsBromley, Megan Rachel (Author) / Manfred, Laubichler (Thesis director) / Sara, Walker (Committee member) / School of Mathematical and Statistical Sciences (Contributor) / School of Earth and Space Exploration (Contributor) / Department of English (Contributor) / Barrett, The Honors College (Contributor)
Created2019-12
Description
This project focuses on using Neutral Gas and Ion Mass Spectrometer (NGIMS) density data for carbon dioxide, oxygen, carbon monoxide, and nitrogen during deep dip campaigns 5, 6, and 8. Density profiles obtained from NGIMS were plotted against simulated density profiles from the Mars Global Ionosphere-Thermosphere Model (MGITM). Averaged temperature profiles were also plotted for the three deep dip campaigns, using NGIMS data and MGITM output. MGITM was also used as a tool to uncover potential heat balance terms needed to reproduce the mean density and temperature profiles measured by NGIMS.
This method of using NGIMS data as a validation tool for MGITM simulations has been tested previously using dayside data from deep dip campaigns 2 and 8. In those cases, MGITM was able to accurately reproduce the measured density and temperature profiles; however, in the deep dip 5 and 6 campaigns, the results are not quite the same, due to the highly variable nature of the nightside thermosphere. MGITM was able to fairly accurately reproduce the density and temperature profiles for deep dip 5, but the deep dip 6 model output showed unexpected significant variation. The deep dip 6 results reveal possible changes to be made to MGITM to more accurately reflect the observed structure of the nighttime thermosphere. In particular, upgrading the model to incorporate a suitable gravity wave parameterization should better capture the role of global winds in maintaining the nighttime thermospheric structure.
This project reveals that there still exist many unknowns about the structure and dynamics of the night side of the Martian atmosphere, as well as significant diurnal variations in density. Further study is needed to uncover these unknowns and their role in atmospheric mass loss.
This method of using NGIMS data as a validation tool for MGITM simulations has been tested previously using dayside data from deep dip campaigns 2 and 8. In those cases, MGITM was able to accurately reproduce the measured density and temperature profiles; however, in the deep dip 5 and 6 campaigns, the results are not quite the same, due to the highly variable nature of the nightside thermosphere. MGITM was able to fairly accurately reproduce the density and temperature profiles for deep dip 5, but the deep dip 6 model output showed unexpected significant variation. The deep dip 6 results reveal possible changes to be made to MGITM to more accurately reflect the observed structure of the nighttime thermosphere. In particular, upgrading the model to incorporate a suitable gravity wave parameterization should better capture the role of global winds in maintaining the nighttime thermospheric structure.
This project reveals that there still exist many unknowns about the structure and dynamics of the night side of the Martian atmosphere, as well as significant diurnal variations in density. Further study is needed to uncover these unknowns and their role in atmospheric mass loss.
ContributorsRobinson, Jenna (Author) / Desch, Steven (Thesis director) / Hervig, Richard (Committee member) / School of Earth and Space Exploration (Contributor) / School for the Future of Innovation in Society (Contributor) / School of International Letters and Cultures (Contributor) / Barrett, The Honors College (Contributor)
Created2019-05
Description
Western culture has oversimplified and mythologized the possibility of first contact with extraterrestrial intelligence. Whether through anthropocentrism, lack of contextual literature and/or available knowledge, or simple misunderstanding, humanity has failed to fully consider the impacts of seeking out alien life. Instead, humanity’s cultural and political representations of extraterrestrials tell us a great deal about the people behind the stories—all of us stuck together on our pale blue dot. This thesis explores the mythological character that is ever-present in the extraterrestrial conversation, and how past and current cultural creators in the global West have perpetuated and changed that paradigm. This thesis is also an exploration of the ways we envision our ability to contact and interact with an unknown extraterrestrial other—in many ways mythological, and in some ways as powerful symbols for struggles against oppression. I argue for a more nuanced, creative, and scientifically driven representation and consideration of first contact with extraterrestrial intelligence.
ContributorsDean, Jake William (Author) / Martin, Thomas W. (Thesis director) / Walker, Sara (Committee member) / Finn, Ed (Committee member) / Historical, Philosophical & Religious Studies (Contributor, Contributor) / School of Earth and Space Exploration (Contributor) / School of Sustainability (Contributor, Contributor, Contributor) / School of Human Evolution & Social Change (Contributor) / Barrett, The Honors College (Contributor)
Created2020-12
Description
With the development and successful landing of the NASA Perseverance rover, there has been growing interest in identifying how evidence of ancient life may be preserved and recognized in the geologic record. Environments that enable fossilization of biological remains are termed, “taphonomic windows”, wherein signatures of past life may be detected. In this dissertation, I have sought to identify taphonomic windows in planetary-analog environments with an eye towards the exploration of Mars. In the first chapter, I describe how evidence of past microbial life may be preserved within serpentinizing systems. Owing to energetic rock-water reactions, these systems are known to host lithotrophic and organotrophic microbial communities. By investigating drill cores from the Samail Ophiolite in Oman, I report morphological and associated chemical biosignatures preserved in these systems as a result of subsurface carbonation. As serpentinites are known to occur on Mars and potentially other planetary bodies, these deposits potentially represent high-priority targets in the exploration for past microbial life. Next, I investigated samples from Atacama Desert, Chile, to understand how evidence of life may be preserved in ancient sediments formed originally in evaporative playa lakes. Here, I describe organic geochemical and morphological evidence of life preserved within sulfate-dominated evaporite rocks from the Jurassic-Cretaceous Tonel Formation and Oligocene San Pedro Formation. Because evaporative lakes are considered to have been potentially widespread on Mars, these deposits may represent additional key targets to search for evidence of past life. In the final chapter, I describe the fossilization potential of surficial carbonates by investigating Crystal Geyser, an active cold spring environment. Here, carbonate minerals precipitate rapidly in the presence of photosynthetic microbial mat communities. I describe how potential biosignatures are initially captured by mineralization, including cell-like structures and microdigitate stromatolites. However, these morphological signatures quickly degrade owing to diagenetic dissolution and recrystallization reactions, as well as textural coarsening that homogenizes the carbonate fabric. Overall, my dissertation underscores the complexity of microbial fossilization and highlights chemically-precipitating environments that may serve as high-priority targets for astrobiological exploration.
ContributorsZaloumis, Jonathan (Author) / Farmer, Jack D (Thesis advisor) / Garcia-Pichel, Ferran (Committee member) / Trembath-Reichert, Elizabeth (Committee member) / Ruff, Steven W (Committee member) / Shock, Everett L (Committee member) / Arizona State University (Publisher)
Created2021
Description
With the ability to observe the atmospheres of terrestrial exoplanets via transit spectroscopy on the near-term horizon, the possibility of atmospheric biosignatures has received considerable attention in astrobiology. While traditionally exoplanet scientists looking for life focused on biologically relevant trace gases such as O2 and CH4, this approach has raised the spectre of false positives. Therefore, to address these shortcomings, a new set of methods is required to provide higher confidence in life detection. One possible approach is measuring the topology of atmospheric chemical reaction networks (CRNs). To investigate and assess this approach, the ability of network-theoretic metrics to distinguish the distance from thermochemical equilibrium in the atmosphere of hot jupiters was tested. After modeling the atmospheres of hot jupiters over a range of initial conditions using the VULCAN modeling package, atmospheric CRNs were constructed from the converged models and their topology measured using the Python package NetworkX. I found that network metrics were able to predict the distance from thermochemical equilibrium better than atmospheric species abundances alone. Building on this success, I modeled 30,000 terrestrial worlds. These models divided into two categories: Anoxic Archean Earth-like planets that varied in terms of CH4 surface flux (modeled as either biotic or abiotic in origin), and modern Earth-like planets with and without a surface flux of CCl2F2 (to represent the presence of industrial civilizations). I constructed atmospheric CRNs from the converged models, and analyzed their topology. I found that network metrics could distinguish between atmospheres with and without the presence of life or technology. In particular, mean degree and average shortest path length consistently performed better at distinguishing between abiotic and biotic Archean-like atmospheres than CH4 abundance.
ContributorsFisher, Theresa Mason (Author) / Walker, Sara I (Thesis advisor) / Hartnett, Hilairy (Committee member) / Line, Michael (Committee member) / Shkolnik, Evgenya (Committee member) / Okie, Jordan (Committee member) / Arizona State University (Publisher)
Created2023