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TSPO was discovered in 1977 and it’s function is still currently unknown. Significant research has suggested that TSPO functions in steroidogenesis to import cholesterol from the mitochondrial outer membrane (MOM) to the mitochondrial inner membrane (MIM) where it is converted into steroids. There were two indications that this is TSPOs

TSPO was discovered in 1977 and it’s function is still currently unknown. Significant research has suggested that TSPO functions in steroidogenesis to import cholesterol from the mitochondrial outer membrane (MOM) to the mitochondrial inner membrane (MIM) where it is converted into steroids. There were two indications that this is TSPOs main function: its elevated levels in steroidogenic tissue and its primary location in the MOM. There is evidence of TSPO binding cholesterol with high affinity, however there is not currently evidence of TSPO transporting cholesterol. STAR, ACBD1, and ACBD3 are proteins thought to be associated with TSPO and steroidogenesis. However, the distribution of these proteins in various eukaryotes show little similarity suggesting that TSPO functions independently. The function of TSPO in steroid synthesis has been called into question because a well-cited research paper claimed that TSPO knockdown resulted in embryonic lethal mice, however there was no evidence presented from their study and this experiment did not produce the same results when repeated in later studies. There are also studies that show TSPO may not be involved in regulation of sterols, but instead may regulate cell stress. The elevated levels of TSPO during inflammation suggest a role for TSPO in cellular stress. Binding interactions with porphyrins and heme also support that TSPO may modulate stress levels. We used the phylogeny of TSPO in order to gain greater insight into the evolutionary function of TSPO. NCBI BLAST searches revealed that TSPO was present in bacteria and had a widespread but patchy distribution in a small set of eukaryotes. From these initial results, we were prompted to search a larger set of eukaryotes for TSPO. All of the prokaryotic and eukaryotic TSPO sequences were used to create a phylogenetic tree that would provide greater insight into the evolution and function of TSPO. If TSPO was from a common ancestor, it is probable that its function is related to sterol regulation whereas if gained in eukaryotes by horizontal gene transfer from bacteria its function is related to stress regulation. The phylogenetic tree was most consistent with an ancestral origin of TSPO with an evolutionary function related to steroid synthesis regulation. However, there is not sufficient research to confirm the function of TSPO.

ContributorsLarson, Stephanie (Author) / Wideman, Jeremy (Thesis director) / Poon, Pak (Committee member) / Barrett, The Honors College (Contributor) / School of Music, Dance and Theatre (Contributor) / School of Life Sciences (Contributor)
Created2021-12
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In the face of the sixth mass extinction on Earth, with the flowering plant family Cactaceae assessed as the fifth most endangered plant or animal family by the International Union for the Conservation of Nature (IUCN), it is imperative that all available tools be used to understand the biodiversity, habitat

In the face of the sixth mass extinction on Earth, with the flowering plant family Cactaceae assessed as the fifth most endangered plant or animal family by the International Union for the Conservation of Nature (IUCN), it is imperative that all available tools be used to understand the biodiversity, habitat suitability, climate change impacts and population viability of cacti. Within the Cactaceae, Mammillaria Haw and the closely related genus Cochemiea (K. Brandegee) Walton of Baja California, Mexico, are species-rich, with 46 regionally endemic taxa, 12 of which have been assessed as threatened or endangered by the IUCN. This study clarifies the evolutionary relationships in the Mammilloid clade, a complex and species-rich clade in tribe Cacteae, and generic circumscription of the genera Mammillaria Haw. and Cochemiea (K. Brandegee) Walton, estimates divergence times, diversification rates and ancestral ranges and explores habitat suitability and the risk of extinction of a representative species within these genera. The r species, Cochemiea halei (K. Brandegee) Walton, a narrowly distributed island endemic, is assessed using species distribution modeling (SDM) and population viability analysis (PVA). SDM in this study includes projections to two climate change scenarios over the next century, using four representative particle concentration pathways, and the PVA uses habitat-specific deterministic and stochastic models. The results of molecular phylogenetic analyses of the Mammilloid cladde restore the genus Mammillaria to monophyly via new combinations in the genus Cochemiea. The taxa in this study are shown to be of recent origin resulting from rapid diversification and radiation. Geological and climatic forces at multiple scales appear to be responsible for the high degree of biodiversity and endemism of these cacti. SDM shows that C. halei is likely to be stranded in its fragmented island habitat, has a facultative adaptation to ultramafic soils, and faces a 21%–53% contraction of its range on the islands under climate change scenarios. PVA suggests that C. halei is at increased risk of extinction in response to slight decreases in fecundity and persistence. In general, the perspectives in this dissertation fill several gaps in our prior knowledge of the evolution, biogeography, and conservation pressures of an important, species-rich group of cacti, occurring in a region of high biodiversity and endemism.
ContributorsBreslin, Peter (Author) / Wojciechowski, Martin F (Thesis advisor) / Albuquerque, Fabio (Committee member) / Fehlberg, Shannon (Committee member) / Majure, Lucas (Committee member) / Rebman, Jon (Committee member) / Arizona State University (Publisher)
Created2020