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Description
The potential of using bio-geo-chemical processes for applications in geotechnical engineering has been widely explored in order to overcome the limitation of traditional ground improvement techniques. Biomineralization via urea hydrolysis, referred to as Microbial or Enzymatic Induced Carbonate Precipitation (MICP/EICP), has been shown to increase soil strength by stimulating precipitation

The potential of using bio-geo-chemical processes for applications in geotechnical engineering has been widely explored in order to overcome the limitation of traditional ground improvement techniques. Biomineralization via urea hydrolysis, referred to as Microbial or Enzymatic Induced Carbonate Precipitation (MICP/EICP), has been shown to increase soil strength by stimulating precipitation of calcium carbonate minerals, bonding soil particles and filling the pores. Microbial Induced Desaturation and Precipitation (MIDP) via denitrification has also been studied for its potential to stabilize soils through mineral precipitation, but also through production of biogas, which can mitigate earthquake induced liquefaction by desaturation of the soil. Empirical relationships have been established, which relate the amount of products of these biochemical processes to the engineering properties of treated soils. However, these engineering properties may vary significantly depending on the biomineral and biogas formation mechanism and distribution patterns at pore-scale. This research focused on the pore-scale characterization of biomineral and biogas formations in porous media.

The pore-scale characteristics of calcium carbonate precipitation via EICP and biogenic gas formation via MIDP were explored by visual observation in a transparent porous media using a microfluidic chip. For this purpose, an imaging system was designed and image processing algorithms were developed to analyze the experimental images and detect the nucleation and growth of precipitated minerals and formation and migration mechanisms of gas bubbles within the microfluidic chip. Statistical analysis was performed based on the processed images to assess the evolution of biomineral size distribution, the number of precipitated minerals and the porosity reduction in time. The resulting images from the biomineralization study were used in a numerical simulation to investigate the relation between the mineral distribution, porosity-permeability relationships and process efficiency. By comparing biogenic gas production with abiotic gas production experiments, it was found that the gas formation significantly affects the gas distribution and resulting degree of saturation. The experimental results and image analysis provide insight in the kinetics of the precipitation and gas formation processes and their resulting distribution and related engineering properties.
ContributorsKim, Daehyun (Author) / van Paassen, Leon (Thesis advisor) / Kavazanjian, Edward (Committee member) / Zapata, Claudia (Committee member) / Mahabadi, Nariman (Committee member) / Tao, Junliang (Committee member) / Jang, Jaewon (Committee member) / Arizona State University (Publisher)
Created2019
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Description
Earthquake-induced soil liquefaction poses a significant global threat, especially to vulnerable populations. There are no existing cost-effective techniques for mitigation of liquefaction under or around existing infrastructure. Microbially Induced Desaturation and Precipitation (MIDP) via denitrification is a potentially sustainable, non-disruptive bio-based ground improvement technique under existing structures. MIDP

Earthquake-induced soil liquefaction poses a significant global threat, especially to vulnerable populations. There are no existing cost-effective techniques for mitigation of liquefaction under or around existing infrastructure. Microbially Induced Desaturation and Precipitation (MIDP) via denitrification is a potentially sustainable, non-disruptive bio-based ground improvement technique under existing structures. MIDP has been shown to reduce liquefaction triggering potential under lab conditions in two ways: 1) biogenic gas desaturation in the short-term (treatment within hours to days) and 2) calcium carbonate precipitation and soil strengthening in the long-term (treatment within weeks to months). However, these experiments have not considered MIDP behavior under field stresses and pressures, nor have they considered challenges from process inhibition or microbial competition that may be encountered when upscaled to field applications. This study presents results from centrifuge experiments and simplified modeling to explore scaling effects on biogenic gas formation, distribution, and retention when simulating field pressures and stresses. Experimental results from the centrifuge demonstrated MIDP’s potential to mitigate the potential liquefaction triggering through desaturation. This study also includes the development of a biogeochemical model to explore the impact of water constituents, process inhibition, and alternative biochemical metabolisms on MIDP and the subsequent impact of MIDP on the surrounding environment. The model was used to explore MIDP behavior when varying the source-water used as the substrate recipe solute (i.e., groundwater and seawater) and when varying the electron donor (i.e., acetate, glucose, and molasses) in different substrate recipes. The predicted products and by-products were compared for cases when desaturation was the targeted improvement mechanism and for the case when precipitation was the primary targeted ground improvement mechanism. From these modeling exercises, MIDP can be applied in all tested natural environments and adjusting the substrate recipe may be able to mitigate unwanted long-term environmental impacts. A preliminary techno-economic analysis using information gained from the modeling exercises was performed, which demonstrated MIDP’s potential as a cost-effective technique compared to currently used ground improvement techniques, which can be costly, impractical, and unsustainable. The findings from this study are critical to develop treatment MIDP plans for potential field trials to maximize treatment effectiveness, promote sustainability and cost-effectiveness, and limit unwanted by-products.
ContributorsHall, Caitlyn Anne (Author) / Rittmann, Bruce E. (Thesis advisor) / Kavazanjian, Edward (Thesis advisor) / van Paassen, Leon A. (Committee member) / DeJong, Jason T. (Committee member) / Arizona State University (Publisher)
Created2021
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Description
Water is a vital resource, and its protection is a priority world-wide. One widespread threat to water quality is contamination by chlorinated solvents. These dry-cleaning and degreasing agents entered the watershed through spills and improper disposal and now are detected in 4% of U.S. aquifers and 4.5-18% of U.S.

Water is a vital resource, and its protection is a priority world-wide. One widespread threat to water quality is contamination by chlorinated solvents. These dry-cleaning and degreasing agents entered the watershed through spills and improper disposal and now are detected in 4% of U.S. aquifers and 4.5-18% of U.S. drinking water sources. The health effects of these contaminants can be severe, as they are associated with damage to the nervous, liver, kidney, and reproductive systems, developmental issues, and possibly cancer. Chlorinated solvents must be removed or transformed to improve water quality and protect human and environmental health. One remedy, bioaugmentation, the subsurface addition of microbial cultures able to transform contaminants, has been implemented successfully at hundreds of sites since the 1990s. Bioaugmentation uses the bacteria Dehalococcoides to transform chlorinated solvents with hydrogen, H2, as the electron donor. At advection limited sites, bioaugmentation can be combined with electrokinetics (EK-Bio) to enhance transport. However, challenges for successful bioremediation remain. In this work I addressed several knowledge gaps surrounding bioaugmentation and EK-Bio. I measured the H2 consuming capacity of soils, detailed the microbial metabolisms driving this demand, and evaluated how these finding relate to reductive dechlorination. I determined which reactions dominated at a contaminated site with mixed geochemistry treated with EK-Bio and compared it to traditional bioaugmentation. Lastly, I assessed the effect of EK-Bio on the microbial community at a field-scale site. Results showed the H2 consuming capacity of soils was greater than that predicted by initial measurements of inorganic electron acceptors and primarily driven by carbon-based microbial metabolisms. Other work demonstrated that, given the benefits of some carbon-based metabolisms to microbial reductive dechlorination, high levels of H2 consumption in soils are not necessarily indicative of hostile conditions for Dehalococcoides. Bench-scale experiments of EK-Bio under mixed geochemical conditions showed EK-Bio out-performed traditional bioaugmentation by facilitating biotic and abiotic transformations. Finally, results of microbial community analysis at a field-scale implementation of EK-Bio showed that while there were significant changes in alpha and beta diversity, the impact of EK-Bio on native microbial communities was minimal.
ContributorsAltizer, Megan Leigh (Author) / Torres, César I (Thesis advisor) / Krajmalnik-Brown, Rosa (Thesis advisor) / Rittmann, Bruce E (Committee member) / Kavazanjian, Edward (Committee member) / Delgado, Anca G (Committee member) / Arizona State University (Publisher)
Created2020